Acuticoccus sp. I52.16.1: MRB58_05100
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Entry
MRB58_05100 CDS
T08076
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acut
Acuticoccus sp. I52.16.1
Pathway
acut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRB58_05100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acut03021
]
MRB58_05100
03400 DNA repair and recombination proteins [BR:
acut03400
]
MRB58_05100
Enzymes [BR:
acut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MRB58_05100
Transcription machinery [BR:
acut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MRB58_05100
DNA repair and recombination proteins [BR:
acut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MRB58_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
UOM35586
LinkDB
All DBs
Position
complement(1138376..1139401)
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AA seq
341 aa
AA seq
DB search
MTTNQKNWQELIRPNKLEVTPGYDPKRIGTVVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSVQIDGVLHEFSSMNGVREDVTDIILNIKEIAVRMSGEGPKRMVLRKQGPGAVTAGDI
QTVGDVSILNPDHVLCTLDEGADIRMEFSVNTGKGYVPADRNRPEDAAIGLIPVDSLYSP
VKRVSYRVENTREGQVLDYDKLSMQVETDGSLSPEDAVAYAARILQDQLSIFVNFEEPTK
PEVADEVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEAEMLRTPNFGR
KSLNEIKEVLAQMGLHLGMEVPNWPPDNIEELAKRYEDHHY
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccaaccagaagaactggcaggagctgatccgcccgaacaagctcgaggtcacg
cccggctacgatccgaagcgcatcggcacggtcgttgccgagcctctggagcgcggcttc
ggcctgacgctcgggaacgccttgcgccgggtgcttctgtcctcgctgcagggtgcggct
gtgacctcggtccagatcgacggtgtcctgcacgagttctcgagcatgaacggcgtgcgt
gaggatgtgaccgacatcatcctcaacatcaaggaaatcgcggtgcgcatgtcgggcgaa
ggcccgaagcgcatggtgctgcgcaagcagggccccggcgcggtgaccgccggcgacatc
cagaccgtgggcgacgtgtcgatcctcaaccccgaccacgtgctgtgcacgctggacgag
ggcgcggacatccgcatggagttctcggtcaacaccggcaagggctacgtgcctgccgac
cgcaaccggcccgaggacgccgccatcggcctgatcccggtcgattcgctgtactcgccg
gtcaagcgcgtttcgtaccgcgtcgagaacacccgcgagggtcaggtgctcgactacgac
aagctgtcgatgcaggtcgagaccgacggttcgctgagccccgaggacgccgtggcctac
gctgcgcgcatcctgcaggaccagctgtcgatcttcgtgaacttcgaagagccgaccaag
ccggaagtcgccgacgaggtgcccgagctcgccttcaacccggcgctgctcaagaaggtc
gacgaactggagctttcggtccgttcggccaactgcctcaagaacgacaacatcgtctac
atcggcgacctcatccagaagtccgaggcggagatgctccgcacgccgaacttcggccgc
aagtcgctgaacgagatcaaggaagtgctcgcccagatgggtctgcacctcggaatggaa
gtgcccaactggccgcccgacaacatcgaggagctggccaagcggtacgaggaccatcac
tattga
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