Acuticoccus sp. I52.16.1: MRB58_05450
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Entry
MRB58_05450 CDS
T08076
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acut
Acuticoccus sp. I52.16.1
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acut03016
]
MRB58_05450
Enzymes [BR:
acut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MRB58_05450
Transfer RNA biogenesis [BR:
acut03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MRB58_05450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UOM35652
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All DBs
Position
1203335..1203949
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AA seq
204 aa
AA seq
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MTITLHHGDLPERLRDVTSIAIDTEAMGLQFPRDRLCLVQLSRGDGNVDLVKIAKGQTAA
PNLTAMLADPTIEKLFHYGRFDMGILAATFGVMPAPIYCTKIASRLVRTYTDRHGLRELA
REVAGEDISKQQQSSDWGAGELTDAQMAYAASDVLHLHKIRKGLDVMLEREGRADLATRL
FAFLPTRVELDLAGWPDVDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
ttgaccatcacgcttcatcacggcgacttgcccgagcgcctcagggacgtgacctccatc
gccatcgacaccgaggcgatggggctgcaatttccgcgcgaccgcctctgcctcgtccag
ttgtcgcggggcgacggcaatgtcgacctggtgaagatcgccaaggggcagaccgccgct
cccaatctcaccgccatgctggccgatcccacgatcgagaagctgttccactatggccgg
ttcgacatggggatcctcgccgccactttcggggtgatgccggcgccgatctattgcacc
aagatcgcatcgcgcctggtgcgaacctacaccgatcggcacggcctgcgcgagctggct
cgcgaggtcgccggggaggacatctccaagcagcagcaatcctccgactggggcgccggc
gagctgaccgacgcgcagatggcctacgccgcctccgacgtcctgcatctgcacaagatc
cgcaagggtctcgacgtgatgctggagcgcgaggggcgggccgatctcgccacgcggctg
ttcgccttcctgccgacccgtgtcgagctcgacctcgccggttggcccgacgtcgacatc
ttcgcccactcatga
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