Acuticoccus sp. I52.16.1: MRB58_07025
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Entry
MRB58_07025 CDS
T08076
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
acut
Acuticoccus sp. I52.16.1
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acut03400
]
MRB58_07025
Enzymes [BR:
acut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MRB58_07025
DNA repair and recombination proteins [BR:
acut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MRB58_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UOM35944
LinkDB
All DBs
Position
1548490..1551363
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AA seq
957 aa
AA seq
DB search
MRVLSVDPCDPFLPTLAARLADGTLWPGGMPDDPLALGDATVYLPTRRAARALATAFLDV
APGAATVLPRIEALGDPEEVPEGRAGVMGQLEARVVLARLIRTWAGAIEPRDPGMRPLVS
TSGPDSVRLADDLLALLDQVETQEADWRDLPGLVERTDLAAHWKITTDFLTIATEAWPAH
LAAAEKITEAAARRADAEAAARHIAEARGPIVVAGSTGSIPATRRLISAIAESPWGVVVL
PGFDRAADPADWGALAEAHDAPGHVQYGMKQLVDTLGIAPEGVARLAPPAPSATPAARTA
TLAASLRPAAATGAWREDRMNAGVAEAFDGLTMVEAADEREEAAAIAIAMRQSVALGETV
ALITPHRALARRVTHQLRLWDIRVDDSGGEPLATTPAGVLARLVAATAFGGGAAEWLALL
KHAGLAIEAEPGAVAAVERLLRGPRIGPGRMFDAMASKEPAAALAETLRTAYAPLLALSR
TASVGTFAAALKTVFEALSDPALGSREPVLAMLTELAERHELTLPAGDWPATFEALIAGI
VVRARPIDDAVRILGPLEARLQSFDHAVLGGLNEGTWPAAPDAGPWMSRGMMGAFGIDLP
ERRIGLSAHDFFTAAHQPRVTLTRARKAAGEPTVASRWWQRLAAFAGDAKKPAYERGAAL
AAWARMLDERPAVRPAPRPEPKPPVAARPASFSVTEIARLVRDPYAIYARRILGLKPLDP
LEQEPDAGNRGELFHDVLARFVGGGHHRAATAADAEDAFRRILDAALRELDFAPEAQALW
GARLRYIAPFILEEERKRMDRADTSLVEVAAVTDLPGGPTLNGRIDRIDLGAAGAEIVDY
KTGNPPTGKQVKSFLEPQLPLEAVLVRAGAVERVPTDIALTGLTYVALGAGRAPVRWAEV
AGEESAALADEARARLTALHMLYQSEDQGYLSRARPMRDSDSGDYDHLARAAEWQNE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtgagggtcctctcggtcgacccctgcgaccccttcctgccgacgctggccgcgcgcctc
gccgatgggacgctctggccgggcggcatgccggacgacccgctggccctcggcgacgcc
accgtctacctgcccacccgccgcgccgcccgcgccctcgccaccgccttcctcgacgtc
gccccgggcgcggccaccgtgttgccgcgcatcgaagcgctcggcgaccccgaggaggtg
cccgagggtcgcgccggcgtcatgggtcagctcgaggcgcgggtcgtcctggcgcggctg
atccgcacctgggccggggcgatcgagccgcgcgatccggggatgcgcccgctcgtctcg
acctccggcccggactcggtgcgcctcgccgacgacctcctcgccctgctcgaccaggtg
gagacccaggaggccgactggcgggatctgccggggctggtggagcggaccgacctcgcc
gcccactggaagatcaccaccgacttcctgaccatcgccaccgaggcgtggcccgcccat
ctcgccgccgccgagaagatcaccgaggccgccgcccgccgtgccgacgccgaggccgca
gcccgccatatcgcggaagcgcgcggccccatcgtcgtcgccggctccaccgggtcgatc
ccggcgacgcgccggctgatctctgcgatcgccgagagcccctggggcgtcgtcgtgctg
ccggggttcgaccgcgccgcggacccggccgactggggcgccctcgccgaggcgcacgac
gcgcccggccatgtgcaatacggcatgaagcagctcgtcgacacgctggggatcgccccg
gagggcgtcgcccggctcgcaccgccggcgccctccgcgacgcccgccgcccgcaccgcg
accctcgccgcctcgctgcgcccggccgccgccaccggcgcctggcgcgaggaccgcatg
aacgccggcgtcgccgaagcgttcgacgggctgacgatggtcgaggcggcggacgagcgc
gaggaggccgccgccatcgcgatcgccatgcgccagtccgtggcgctgggcgagacggtc
gcgctcatcaccccgcaccgtgcgctggcccggcgcgtgacgcatcagctccgcctgtgg
gacatccgggtcgacgactcgggcggcgagccgctggcgacgacgccggccggggtgctc
gcccgcctcgtcgccgcgaccgcgttcggtggcggcgcggcggagtggctggcgctcctg
aagcacgcgggcctcgcgatcgaggccgagccgggcgccgtcgccgcggtggagcggctg
ctgcgcggccctcgcatcggccccggccgcatgttcgacgcgatggccagcaaggagccg
gccgccgcgctcgccgagaccctgcgcaccgcctacgcaccgctcctcgcgctgtcccgg
accgccagtgtcggcaccttcgccgccgcgctgaagaccgtgttcgaggcgctctcggac
cctgccctcggctcgcgcgagccggtcctcgccatgctgaccgagctggccgagcggcac
gagctgacgctgcccgccggcgactggccggcgacgttcgaggcgctgatcgccggcatc
gtcgtccgcgcgcgaccgatcgacgacgcggtgcgcatcctggggccgctggaagcgcgg
ctccagtcgttcgaccacgcggtgctgggcgggctcaacgagggcacctggcccgccgcg
cccgacgccggcccctggatgagccgcggcatgatgggcgccttcgggatcgacctgccg
gagcgccgcatcggcctctccgcgcacgacttcttcaccgcagcgcatcagccgcgcgtg
acgctgacgcgcgcccgcaaggccgccggcgagccgacggtcgcctcgcgctggtggcag
cgcctcgccgccttcgccggggatgccaaaaagcccgcctatgagcgcggcgcggcgctg
gccgcgtgggcccgcatgctggacgagcgccccgccgtgcgcccggccccgcggcccgag
cccaagccgccggtcgccgcccgtccggcatccttctccgtcaccgagatcgctcggctg
gtgcgcgatccgtacgccatctacgcgcggcgcatcctgggcctgaagccgctcgatccg
ctggagcaggagcccgacgccggcaaccgcggcgagctctttcacgacgtgctcgcccgc
ttcgtcggcggcgggcaccatcgcgcggccaccgccgcggacgccgaggacgccttccgc
cgcatcctcgacgcggcgctgcgcgagctcgacttcgcgcccgaagcgcaggccctctgg
ggcgcgcggctgcgctacatcgcccccttcatcctggaggaggagcgcaagcgcatggac
cgggcggacacctcgctggtcgaggtcgcggccgtcaccgaccttcccggcgggccgacg
ctgaacgggcgcatcgaccgcatcgacctcggcgccgcgggggccgagatcgtcgactac
aaaaccggaaatccccccaccggaaagcaggtcaagagcttcctggagccgcagcttccg
ctggaggcggtactcgtgcgcgccggtgccgtcgagcgcgtgccgaccgacatcgcgctg
acgggcctcacctatgtggcgctcggcgccggccgcgccccggtgcgctgggccgaggtg
gcgggcgaggagagcgccgcccttgccgacgaggcgcgcgcccgcctcaccgcgctccac
atgctctaccagagcgaggatcagggctacctgtcgcgcgcccgcccgatgcgcgacagc
gactccggcgactacgaccacctcgcccgcgccgccgagtggcagaacgaatga
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