KEGG   Acuticoccus sp. I52.16.1: MRB58_10040
Entry
MRB58_10040       CDS       T08076                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
acut  Acuticoccus sp. I52.16.1
Brite
KEGG Orthology (KO) [BR:acut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acut03400]
    MRB58_10040
Enzymes [BR:acut01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MRB58_10040
    5.6.2.6  RNA 3'-5' helicase
     MRB58_10040
DNA repair and recombination proteins [BR:acut03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MRB58_10040
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 AAA_25 DEXQc_Suv3 E2_bind
Other DBs
NCBI-ProteinID: UOM36497
LinkDB
Position
complement(2226032..2228605)
AA seq 857 aa
MLTIPDIARAARALPEPFEGWFAGQGWTPRPHQLALIEKAGEGKSTLLIAPTGAGKTLAG
FLPSLIEIADEFRRRNAAVREGPHTLYISPLKALAVDIARNLERPIAEMGLPVTTETRTG
DTPQNRRRRQKENPPDILLTTAEQIALLISQPDAARFFSELKVVIVDELHSLVTSKRGDL
LALGLARLRRHAPDLRTIGLSATVAEPDDLRGWLVPFTSPDPTPRADDGRGVPERRPVGP
ASGLADLVVVEGGAKPDLSILATEQRVPWSGHMTRWAVGDVYQLIKAHRTTLVFVNTRSQ
AETLFYELWRINEDTLPIALHHGSLEREQRRKVEAAMARNALRAVVCTSTLDLGIDWGDV
DLVVHVGAPKGASRLAQRIGRANHRMDEPSKAILVPSNRFEVMECQAALDASYLGHQDTP
PIKEGALDVLAQHVVGVAVADAFDAIDLYEEIRSAYPYRTLDWETFERVVDFAATGGYAL
RAYERYAKIRRRKDGLWRITHPDVAKQYRLNVGTIVELAMLPVRLVSWRRGILSKRGPIL
GQLEEYFLSSLAPGDTFLFSGQVLKLEAVRENEVLVTKAQTNEPKIPYYGGSKFPLTTYL
ASVVRQMLADPANRTALPEQVRDWLDLQAARSRLPKADELLVETFPRGNRHYLVAYPFEG
RLAHQTLGMLLTRRLERAGLKPMGFVASDYALAIWALEDLSAHFDAAGAAMADLFAEDML
GDDLDEWLADSMLMKRTFRAVAQIAHLVERRHPGQEKTGRQITLSTDLVYDVLRSHEPDH
ILLRATWADAATGLLDIRRLGQMLARVRHDIVHVRLERISPLAVPIMLEIGREPVQGEAR
DALLVDAADELVREAMG
NT seq 2574 nt   +upstreamnt  +downstreamnt
gtgctcaccatacccgacatcgcccgcgccgcgcgcgccctgcctgagccgttcgaaggc
tggttcgccggccagggctggacgccgcgcccgcaccagctggcgctgatcgagaaggcg
ggcgagggcaagtccacgctcctcatcgccccgaccggcgcgggaaagacgctcgccggc
ttcctgccgagcctcatcgagatcgcggacgagttccgccggcgcaacgccgccgtgcgc
gaggggccgcacacgctctacatctccccgctcaaggcgctggcggtggacatcgcccgc
aatctcgagcggccgatcgccgagatgggcctccccgtcaccaccgagacccgcaccggc
gacacgccgcagaaccggcggcggcggcagaaggagaacccgccggacatcctgctgacg
acggcagagcagatcgccctcctgatcagccagcccgacgccgcccgcttcttctccgag
ctgaaggtcgtcatcgtcgacgagttgcattcgctcgtcacctccaagcgcggcgacctt
ctcgcgctcgggctggcgcgactgcgccggcatgcgccggatctgcgcaccatcggcctc
tccgcgaccgtcgcggagccggacgacctgcgcggctggctcgtccccttcacctcgccc
gacccgacaccgcgcgcggacgacggccgtggcgttcccgaacggcgccctgtcggcccg
gcgtccggcctcgccgatctcgtcgtcgtcgaaggcggggcgaagccggacctctcgatc
ctggcgaccgagcaacgcgtcccctggtccgggcacatgacacgctgggcggtgggcgac
gtctaccagctcatcaaggcgcaccggacgacgctcgtcttcgtcaacacccgctcgcag
gccgagacgctattctacgagctgtggcgcatcaacgaggacacgctcccgatcgccctg
caccacggctcgctggagcgcgagcagcggcgcaaggtggaggcagcgatggcccgcaac
gcgctgcgcgccgtcgtctgcacctccacgctcgacctcgggatcgactggggcgacgtc
gacctcgtcgtccacgtcggcgcgccgaagggcgcctcgcggctcgctcagcgcatcggc
cgcgccaaccaccggatggacgagccgtccaaggcgatcctcgtcccgtcgaaccggttc
gaggtgatggagtgccaggcggcgctggacgcgtcgtatctcggccatcaggacacgcca
cccatcaaggagggcgcgctcgacgtcctggcgcagcacgtcgtcggcgtggcggtcgcc
gacgcgtttgacgcgatcgacctctacgaggagatccgctccgcctacccctaccgcacc
ctcgactgggagacgttcgagcgcgtcgtcgacttcgcggcgaccggcggctacgcgctg
cgggcctacgagcgctacgccaagatccgccggcgcaaggacgggctgtggcgcatcacc
caccccgacgtcgccaagcagtaccggctcaacgtcggcaccatcgtggaactggcgatg
ctgccggtgcggctcgtctcctggcggcgcggcatcttgagcaagcgcggcccgatcctg
ggccagctcgaagaatatttcctctcttcgctggcaccgggcgacacgttcctcttctcc
ggtcaggtcctcaagctggaggccgtgcgcgagaacgaggtcctcgtcaccaaggcgcag
accaacgagccgaagatcccctactacggcggctccaagtttccgctgacgacctatctc
gcctccgtcgtgcggcagatgctggccgaccccgccaaccgcaccgccctccccgagcag
gtgcgcgactggctggacctgcaggcggcccgctcgcgcctgcccaaggcggacgagcta
ctggtcgagaccttcccgcgcggcaaccgccactacctcgtcgcctacccgttcgaaggg
cggctggcgcatcagacgttggggatgctgctgacccggcggctggagcgcgcgggactg
aagccgatgggcttcgtcgcctccgactacgcgctcgccatctgggcgctggaggacctc
tccgcccacttcgacgcggcgggcgcggcgatggccgacctcttcgccgaggacatgctg
ggcgacgatctcgacgagtggctcgccgattccatgctgatgaagcgcaccttccgcgcc
gtggcgcagatcgcccacctggtggagcggcgccatccgggccaggagaagaccggccgg
cagatcaccctctccaccgacctcgtctacgacgtgctgcgctcgcacgagccggaccac
atcctcctgcgcgccacctgggcggacgcggcgaccggcctcctcgacattcgtcgcctc
ggccagatgctggcgcgcgtgcggcacgacatcgtccacgtgcggctggagcggatctcg
ccgctcgcggtgccgatcatgctggagatcggccgcgagccggtgcagggcgaggcccgc
gacgccctgctggtggacgccgccgacgagctggtgcgcgaggcgatgggctga

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