Acuticoccus sp. I52.16.1: MRB58_14435
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Entry
MRB58_14435 CDS
T08076
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acut
Acuticoccus sp. I52.16.1
Pathway
acut03410
Base excision repair
acut03430
Mismatch repair
acut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MRB58_14435 (recJ)
03430 Mismatch repair
MRB58_14435 (recJ)
03440 Homologous recombination
MRB58_14435 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acut03400
]
MRB58_14435 (recJ)
DNA repair and recombination proteins [BR:
acut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MRB58_14435 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MRB58_14435 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MRB58_14435 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UOM33065
LinkDB
All DBs
Position
complement(3174091..3175929)
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AA seq
612 aa
AA seq
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MEKVSHRVMVEASCVQSVPVSETSVLGVDQSLSGRRWMRRLDERGERTAMALAQRHTLPE
IVARVLAGRGVDLDNAGRELTPTIRELMPDPSTLTACDALVARLADAIDRGERIVLFADY
DVDGATSAAVVARTLAHLAVTPRIVIPDRITDGYGPSIPAMEALADEGTDVLLCLDCGAG
AIEPVAAAKARGMTVLVIDHHPVTALAPADHIVNPNRPDDLSGLSDCAAVGVAFIVMVGL
MREMRRRGRFEGRTEPSLMPLLDCVALGTVADVVPLSPLNRAFVTRGLVALRRRENLGLA
ALTTVSKLSGPVDAGHLGFVLGPRINAGGRIGRSGLGARLLTSDDPAETEAIATELDRLN
RERRSLETAALAEATALVDEDAAVIVVAGRWHPGVVGLVAARLKERFRKPALAIGLGDEA
GTGSGRSISGVDLGAAIREAAAAGLLLKGGGHAMAAGLTVAPERIEALTAWLTERLGPAV
REAVLRDTLKIDAIAAPGALDEPLARLLTEHGPWGAGRPKPVIALDGAYIDHVMKVGTGE
SLKLRLSGRAGPPIEAMLFRPAGPVGDRLRAARGATVNIAVEVAHGAFRGVPRADITVVD
VAEISAAVRRAA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtctcgcatcgggtgatggtcgaggcgtcctgcgtccagagtgtccccgtg
tctgaaacctccgtcctcggtgtcgatcaatcgctgtccggccgtcgctggatgcgccgg
ctcgacgaacgcggcgagcgcaccgcaatggcgctcgcccagcgccataccctgccggag
atcgtcgcacgggtgctcgccggccgcggcgtcgatctcgacaatgccgggcgcgagctg
acgccgaccatccgcgagctgatgccggacccgtccaccctcaccgcttgcgacgcgctg
gtcgcccgcctcgccgacgccatcgaccgcggtgagcgcatcgtcctcttcgccgactac
gacgtcgacggcgcgacgtccgccgccgtcgtcgcgcgcacgctcgcccacctcgccgtc
acgccgcggatcgtcatccccgaccgcatcaccgatggatacggcccctcgatccccgcc
atggaggcgctggccgacgagggaaccgacgtcctcctctgcctcgactgcggcgccggc
gcgatcgagccggtggccgccgccaaggcccgcggcatgaccgtcctggtgatcgaccat
cacccggtgacggcgctcgccccggccgaccacatcgtcaacccgaaccggccggacgac
ctctcgggcctgtccgactgcgcggccgtgggcgtcgccttcatcgtcatggtggggctg
atgcgcgagatgcgccgccgcggccggttcgaggggcgcaccgagcccagcctcatgccg
ctgctcgactgcgtcgcgctgggcaccgtggcggacgtggtgccgctgtcgccgctcaac
cgcgccttcgtcacccgcggcctggtggcgctgcggcggcgcgagaacctggggctggcg
gcgctgacgaccgtctccaagctctccggtccggtggatgcggggcacctcggtttcgtc
ctcggcccccggatcaacgcgggcgggcgcatcggccggtccggcctcggcgcccgactg
ctgacgtccgacgatccggccgagaccgaagcgatcgccaccgagctcgatcgcctcaac
cgcgagcgccgcagcctcgagaccgccgccctcgccgaggccacggcgctggtcgacgag
gacgctgcggtgatcgtggtcgccgggcgctggcatccgggcgtcgtcggcctggtggcg
gcacggctcaaggagcggttccgcaagccggccctcgccatcggcctcggcgacgaggcg
ggcaccgggtcgggccgctcgatctccggcgttgacctcggcgcggcaatccgcgaggcg
gccgccgccgggctcctgctcaagggcggcggacacgcgatggcggccggcctgaccgtg
gcgcccgagcggatcgaagcgctgacggcatggctgaccgaacggctcggccccgccgtg
cgcgaggcggtcctgcgcgacaccctgaagatcgacgccatcgccgcccccggcgccctc
gacgaaccgctcgcccgcctcttgaccgagcacggcccgtggggcgccggccggcccaag
cccgtcatcgcgctcgacggcgcctatatcgaccatgtgatgaaggtcggcacgggcgaa
tcgctgaagctgcgcctttcgggccgcgccggcccgccgatcgaggcgatgctgttccgc
cccgccggtcccgtcggcgaccgcctgcgtgccgcgcgaggcgccacggtcaacatcgcc
gtcgaggtcgcgcacggcgccttccgcggcgttccgcgggccgacatcaccgtcgtcgac
gtcgccgagatcagcgccgccgtccgccgcgccgcctaa
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