Acuticoccus sp. I52.16.1: MRB58_16230
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Entry
MRB58_16230 CDS
T08076
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
acut
Acuticoccus sp. I52.16.1
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acut03016
]
MRB58_16230 (thpR)
Enzymes [BR:
acut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MRB58_16230 (thpR)
Transfer RNA biogenesis [BR:
acut03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MRB58_16230 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UOM33393
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All DBs
Position
3604291..3604842
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AA seq
183 aa
AA seq
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MPRLFTALTLPEDVRMWMTGLRGGLRGARFIDAENYHVTLRFIGDIDEPTADDVVDALSR
IRRAPVTVRLCGLGSFGNKKQPHAVWARVEPTSELMELQADQERALQRIGLSAEARRFTP
HVTIARCKGATARDVADWLTLHGGFSAPPFVAETFALLSSRASVGGGPYVTEDVYPLGLA
RAA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctgttcaccgccctcacgctccccgaggatgtccgaatgtggatgaccggc
cttcgcggcggtctgcgcggggcgcgctttatcgacgcggaaaactaccacgtcaccctg
cgtttcatcggcgacatcgacgagccgacggccgacgatgtggtggacgcattgtcgcgg
atccggcgcgctccggtgacggtgcggctctgcggcctgggctcgttcggcaacaagaag
cagccgcatgcggtgtgggcccgcgtcgagccgacgtcggaactgatggagctgcaggcc
gaccaggagcgggcgctgcaacgcatcggcctgtcggccgaggcgcgccggttcaccccg
cacgtcaccatcgcgcgctgcaagggcgccaccgcccgcgacgtcgccgactggctgacg
ctgcacggcggcttcagcgcgccgcccttcgtggcggagacgtttgcgctgctgtcctcc
cgcgcatcggtcggcggcggtccctatgtgacggaagacgtctatccgctgggcctggcg
cgcgccgcctga
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