Acuticoccus sp. I52.16.1: MRB58_19610
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Entry
MRB58_19610 CDS
T08076
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acut
Acuticoccus sp. I52.16.1
Pathway
acut03030
DNA replication
acut03430
Mismatch repair
acut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRB58_19610 (dnaE)
03430 Mismatch repair
MRB58_19610 (dnaE)
03440 Homologous recombination
MRB58_19610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acut03032
]
MRB58_19610 (dnaE)
03400 DNA repair and recombination proteins [BR:
acut03400
]
MRB58_19610 (dnaE)
Enzymes [BR:
acut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MRB58_19610 (dnaE)
DNA replication proteins [BR:
acut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MRB58_19610 (dnaE)
DNA repair and recombination proteins [BR:
acut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MRB58_19610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF5487
Motif
Other DBs
NCBI-ProteinID:
UOM34017
LinkDB
All DBs
Position
complement(4343740..4347183)
Genome browser
AA seq
1147 aa
AA seq
DB search
MFIHLRVHSAYSLLEGALHLKKIVGLAAADNQPAVAVSDTANLFGALEFSEKAFGDGVQP
IIACTVPIRLAERIQGGKRIAPVARLPMVATSEESFANLQRLISYAYLRSDGGEVALPVD
GLAGAVDGIIALSGWIDGPVGKTHALGDPESASALFDQLHETFGDRFYCEVQRHGTSAEN
TFESFAVGEAYRAGVPLVATNEVYFAARDDYEAHDALIAIAEGRRLGDDDRRRLTPEHYF
KTQGEMEALFSDLPEAIASTVEIAMRSHFRVKKRPPMLPRFIATERKVAGLPPVEQSDEE
ALAEEAERLTQMAHDGLERRFASRGMAPGVDREAYMKRLDHELGIICRMKFPGYFLIVAD
FIQWSKANDIAVGPGRGSGAGSLVAYALTITDLDPLRFDLLFERFLNPERVSMPDFDVDF
CQEKRDRVIHYVQERYGADRVAQIITFGTLQARAVVRDVGRVLDMPYFKVDQLAKMVPSN
PANPITLAQALEQETKLQEAKAQDGEIDRLLQMALKLEGLYRHASTHAAGIVIGDRPLEE
IVPLYRDPRSDLPVTQYNMKWVESGGLVKFDFLGLKTLTTIERALSLIPVEIDLDTLPLD
DKETYELLARGETAGVFQLESQGMRKALVGMKPDRFEDIIAIVALYRPGPMDNIPSYNLR
KQGLEEPDYLHPKLEPILKETYGIIIYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIAAE
MAVQRDRFVDGAVKDGTKAADANRIFDLVAKFANYGFNKSHAAAYALVAYHTAYLKAHYP
SEFLAASMTLDMGNTDKLADFRGEAQRMGITVRPPSIATSKGEFSVEKGDIVYGLGAIKG
VGWPLVHHIEATRAAAPYEDLSDFANRLDPKAAPKRSLEALVAAGTFDEWVPDRGSLSAG
IEQVLGVANRVASGAAVGQNDFFGAAAAEDIRLPTGAVWTPHERLKRELDAIGFYLSAHP
LDDYRETLEKAGIPQWRDFPAALRRGEGAKLAGVVVSRQERRTKSGNRMGIIALSDPSGQ
YEAIAFSDTLDACREKLEPGNCVLLSVSAREEEEGVSVRIGHVEPLEKLAAKQSTTLTVF
LDRADVIESIDRLIGHQGMCSVRLVALTGANGHSREVELALKEPRAVSRSVANAIKAMPG
VIDVAYA
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgttcatccacctgagggtccattcggcctattccctcctggaaggcgcgctgcacctg
aagaagatcgtcggcctcgccgcggccgacaatcaacccgccgtggcggtgagcgacacg
gccaacctcttcggcgcgttggaattttcggagaaggccttcggtgacggggtgcagccg
atcatcgcctgcaccgtgccgatccgcctcgccgagcgcatccagggcggcaaacgcatc
gcgcccgtcgcgcggctgccgatggtcgccaccagcgaagagagcttcgccaacctccag
cgcctgatctcctacgcctacctgcggtcggacggcggcgaggtcgccctcccggtcgac
gggctggccggcgcggtggacggcatcatcgccctctccggctggatcgacgggccggtg
ggcaagacccacgcgctgggcgatcccgagagcgcttcggcgctgttcgatcaacttcac
gaaacgttcggtgatcgtttctattgcgaggtgcagcgccatggaacatcggcggaaaac
accttcgagtccttcgccgtcggcgaggcctatcgcgccggcgtcccgctggtggccacc
aacgaagtctacttcgccgcccgcgacgactacgaggcgcacgacgcgctgatcgccatc
gccgagggccggcgcctgggcgacgacgaccgccgccgcctcacgcccgagcactacttc
aagacgcaaggggagatggaagccctcttcagcgacctgccggaggcaatcgcctccacg
gtggaaatcgcgatgcgctcccacttccgcgtcaagaagcgcccgccgatgctgccgcgc
ttcatcgccaccgagcgcaaggtcgccggcctcccccccgtcgagcagagcgacgaggag
gccctcgccgaggaagccgagcggctgacgcagatggcgcacgacggcctcgagcgccgc
ttcgcctcgcgcggcatggcccccggcgtcgaccgcgaggcgtacatgaagcgcctcgac
cacgaactcggcatcatctgccgcatgaagttccccggctacttcctcatcgtcgccgac
ttcatccagtggtccaaggcgaacgacatcgccgtcggccccggccgcggctcgggcgcg
ggctccctcgtcgcctacgcgctgaccatcaccgacctcgaccccctcaggttcgacctc
ctcttcgagcgcttcctcaaccccgaacgcgtctcgatgcccgacttcgacgtcgacttc
tgccaggagaagcgcgaccgggtgatccactacgtgcaggagcgctacggcgccgaccgc
gtggcgcaaatcatcaccttcggaacgttgcaggcccgcgccgtggtgcgcgacgtcggc
cgcgtgctggacatgccctacttcaaggtcgaccagctggcgaagatggtcccctcgaac
ccggcgaacccgatcaccctcgcccaggcgctggagcaggagaccaagctgcaggaggcc
aaggcgcaggacggcgagatcgaccggctgctgcaaatggcgctgaagctcgagggtctc
taccgccacgcctcgacccacgccgccggcatcgtcatcggcgaccggccgctggaggag
atcgtccccctctaccgtgacccgcggtccgaccttccggtcacccaatacaacatgaag
tgggtggaatcgggcggcctcgtcaaattcgacttcctgggtctcaaaacgctcacgacc
atcgagcgcgccctctcgctcatcccggtcgagatcgacctcgacaccctccccctcgac
gacaaggagacctacgagctcctcgcccgcggcgagaccgccggcgtcttccagctggaa
agtcagggcatgcgcaaggcgctggtcggcatgaagcccgaccggttcgaggacatcatc
gccatcgtcgccctctaccgtccgggtccgatggacaacatcccctcctacaacctgcgc
aaacagggcctcgaagagccggactacctgcaccccaagctggaaccgattctgaaagag
acctacggcatcatcatctaccaggagcaggtgatgcagatcgcgcaggtcctctcgggc
tactcgctcggcgaagcggacctcctgcgccgcgccatgggcaagaagatcgccgccgag
atggccgtgcagcgcgaccgcttcgtcgacggcgcggtgaaggacggcaccaaggccgcc
gacgccaaccgcatcttcgacctcgtcgccaagttcgccaactacggcttcaacaagtcg
cacgcggccgcctacgccctcgtcgcctaccacacggcctacctcaaggcgcactatccg
tccgaattcctggccgcttcgatgacgctcgacatgggcaacaccgacaagctggccgac
ttccgcggcgaggcgcagcgcatggggatcaccgtgcgcccgccctccatcgccacctcg
aagggggagttctcggtcgagaagggcgacatcgtctacggcctcggcgcgatcaagggc
gtcggctggccgctcgtccaccacatcgaggcgacccgtgccgcggcgccctacgaggac
ctgtccgacttcgccaaccggctcgaccccaaggccgcgccgaagcgctcgctggaggcc
ctcgtcgccgccggcacgttcgacgagtgggtgcccgaccgcggcagcctctcggccggg
atcgagcaggtcctcggcgtcgcgaaccgggttgcgtcgggcgcggccgtcggccagaac
gactttttcggcgcggccgcggcggaggacatccgcctccccaccggcgccgtctggacc
ccgcacgaacggctgaagcgcgagctcgacgccatcggtttctacctctcggcccacccg
ctggacgactaccgcgagacgctggagaaggccggcatcccgcaatggcgcgacttcccc
gccgcgctgcgccggggcgagggtgccaagctcgccggcgtcgtcgtctcgcgccaggag
cggcgcaccaagagcggtaaccgcatgggaatcatcgccctgtccgacccgtccggccag
tacgaagcgatcgccttctccgacacgctggacgcctgccgcgagaagctggagcccggc
aactgcgtgctgctgtcggtctccgcacgcgaggaggaggaaggcgtctcggtgcgcatc
ggccacgtcgagccgttggaaaagctcgccgccaagcagtcgaccacgctcaccgtcttc
ctcgaccgggccgacgttatcgaatccatcgaccgcctgatcggccaccagggcatgtgc
tcggtccgcctcgtcgcactgacgggcgccaacggtcacagccgcgaagtcgagctggcg
ttgaaggagccgcgcgccgtctcccgctcggtcgccaacgccatcaaggcgatgccgggc
gtgatcgacgtcgcctacgcctga
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