KEGG   Acinetobacter sp. TGL-Y2: AMD27_02795
Entry
AMD27_02795       CDS       T04425                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
acv  Acinetobacter sp. TGL-Y2
Pathway
acv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMD27_02795 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acv03021]
    AMD27_02795 (rho)
   03019 Messenger RNA biogenesis [BR:acv03019]
    AMD27_02795 (rho)
Transcription machinery [BR:acv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AMD27_02795 (rho)
Messenger RNA biogenesis [BR:acv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AMD27_02795 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT S1CSD-TOTE-2 AAA_25 AAA_22 AAA
Other DBs
NCBI-ProteinID: AMW77929
LinkDB
Position
complement(599574..600842)
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYISPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLMMELGNGSTEDLTSRVVDLIAPIGKGQRSIIVAPP
KAGKTILLQNIAQSIVRNNPEIFLIVLLIDERPEEVTEMERTVRGEVIASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGLDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDEVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMSEDNLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
AN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaaccgataggcgaactcatcaaaattgctgagttc
atgggcctagaaggaatggcacgtaaccgtaagcaagacattatctttgccattttgaaa
cgccatgcaatgaatggtgaagagatttttggtgatggtgttcttgaaattctttctgat
ggttttggctttcttcgttccgcagcaggctcttacctcgcgggtcctgatgatatctat
atcagtccgtcgcaaattcgtcgttttaacttacgcacgggtgacaccattacaggtacg
attcgtccaccaaaagaaggtgaacgttattttgcactgttaaaagtcaaccaaattaac
tacgacacacctgaaaactcacgtaataaaattctttttgaaaacttaaccccactcttc
ccaactgaacagttgatgatggagttagggaatggttcgactgaagatttgacctctcgt
gtggtcgatctgatagcgccgattggtaaaggtcaacgttcaattatcgttgcaccaccc
aaagcgggtaaaaccattttacttcaaaatatcgcacaatcgattgtacgtaataaccct
gaaattttcctgatcgttcttcttattgacgaacgtccagaggaagtaacagaaatggaa
cgtacagttcgcggtgaagtcattgcatcaaccttcgatgaagcccctgctcgtcacgtt
caagtggctgaaatggtcattgaaaaagcgaaacgtttagttgaacacaagaaagatgtg
gttattctacttgactccatcacgcgtttagcgcgtgcttataatactgtgattccgtca
tcgggcaaagtattgaccggtggtttggatgcacatgcacttgagcgtccaaagcgtttc
ttcggtgctgcacgtaatatcgaagaaggtggctcattgaccatcatttctactgcgctg
attgaaacgggcagtaaaatggatgaagtgatttacgaagaattcaaaggtacaggtaac
caagagattacacttgatcgccgtattgctgaaaaacgcgtcttccctgctatgaacatt
aaaaaatcaggcacgcgtcgtgaagaacgtctcatgtctgaagataatctacgtaaagtc
tggattttacgtaagctactacatccaatggatgagcttgcagcaatggaatttctactc
gaccgtatgaaagaaaccaaaaccaatgatgacttctttgatcaaatgaagcgtaaagct
gcaaattaa

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