Acinetobacter sp. TGL-Y2: AMD27_04925
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Entry
AMD27_04925 CDS
T04425
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
acv
Acinetobacter sp. TGL-Y2
Pathway
acv03030
DNA replication
acv03430
Mismatch repair
acv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMD27_04925
03430 Mismatch repair
AMD27_04925
03440 Homologous recombination
AMD27_04925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acv03032
]
AMD27_04925
03400 DNA repair and recombination proteins [BR:
acv03400
]
AMD27_04925
Enzymes [BR:
acv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMD27_04925
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AMD27_04925
DNA replication proteins [BR:
acv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMD27_04925
RNase H
AMD27_04925
DNA repair and recombination proteins [BR:
acv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMD27_04925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
RVT_3
AF_2299-like_N
Motif
Other DBs
NCBI-ProteinID:
AMW78291
UniProt:
A0A143G243
LinkDB
All DBs
Position
complement(1058000..1059517)
Genome browser
AA seq
505 aa
AA seq
DB search
MSQITLYVDGACRGNPGLGGWGAYVITENGEHKLFGGEPNTTNNRMELSAAIEGIAFCPI
DAKIVIWTDSIYVKRGITEWIQGWKKKNWKDVKNPDLWKKLDATCQNREIEWNWIKGHSG
HPGNEMADHLANLGADQTAERLKTGETHIQAAATAKITQDAKKKVDKDWLLDDPFGFDLM
EETEELGIEVEVENSEPDTSVESAINNASLATEAVITNSMNNEVQMTNEVVIDQDHLASE
NSASEHSTENQLEQSADHLVNQHPHIVITPAKLKLQGPRQLILDTETTGFYYQDSDRIIE
VGALEMINRKLTGSSIHIYINPKKPVGDSENVHGISDDFLKDKPVYAEIADVLFDYLKGA
EIIAHNASFDMNFLDMEFKRAGYKALSDVCTVTDTLAMAKAKHPGQKNSLDALVRRYEVP
QRDRTFHGALLDAEILADVYLFMTGGQVSFDMDALSSHQNENRSTRQKIEIDLPVIWASQ
EELEQHENWVKQYQEKKGEPCLFAK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaattacgctttatgtagatggtgcatgccgtggaaacccgggtttaggcggt
tggggtgcatatgtcattacagaaaatggcgagcataagttatttggtggagaacccaac
accaccaataatcgaatggagttgagtgcagccattgaagggatcgccttttgccccatc
gatgccaaaattgtcatttggactgattctatttatgtgaaacgcggtattaccgagtgg
attcaaggctggaaaaagaaaaactggaaagacgttaaaaaccctgatctttggaaaaag
ctcgatgccacctgtcaaaaccgtgaaattgaatggaattggattaaaggtcattctgga
catccgggcaatgaaatggcagatcaccttgccaatttaggcgcagatcaaactgctgaa
cgtcttaaaactggtgaaactcacattcaagctgctgctacagcaaaaatcacacaagat
gctaaaaaaaaagtagataaagactggctactcgacgaccctttcggttttgatctgatg
gaggagactgaagagctgggcattgaagtagaagtagaaaatagcgagccagatacttca
gttgaatccgcaatcaacaatgcatcattagcgactgaagccgttataacaaattcaatg
aataatgaagttcaaatgacgaatgaggttgttattgatcaagaccatttagcgtcagag
aattcagcgtcagagcattctactgaaaatcagcttgagcagagtgcggatcatctcgtt
aatcagcacccacacattgtcattacacccgcaaaattaaaactgcaaggtccgcgtcaa
ctgattttagatacagaaaccacaggtttttattatcaagacagtgaccgcatcattgaa
gtgggtgcgctggaaatgatcaaccgtaaactgacgggaagctccattcatatttatatc
aacccgaaaaaaccagtcggtgattctgaaaatgtgcatggtatttcagatgacttccta
aaagataaaccggtctatgctgaaattgcagatgtgctttttgattatctaaaaggtgcg
gaaatcattgcgcataacgccagctttgatatgaacttcttagacatggagtttaaacgt
gcaggctataaagcactctctgacgtctgtacagtcactgataccctcgctatggccaaa
gccaaacatccgggtcagaaaaactcactcgatgcattggttcgacgttatgaagtacct
cagcgcgatcgtaccttccatggtgctttactcgatgccgaaattttagcagacgtctat
ctattcatgaccggtggtcaagtttcatttgacatggatgccttgtcctctcatcaaaat
gaaaaccgatctacgcgtcaaaaaatcgagattgatttgcccgttatttgggcatcccaa
gaagagcttgaacaacatgagaactgggtcaaacaatatcaagaaaaaaaaggtgagcct
tgtctttttgcaaaataa
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