Acinetobacter sp. DUT-2: A0J50_03060
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Entry
A0J50_03060 CDS
T04353
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acw
Acinetobacter sp. DUT-2
Pathway
acw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0J50_03060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acw03400
]
A0J50_03060
Enzymes [BR:
acw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A0J50_03060
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A0J50_03060
DNA repair and recombination proteins [BR:
acw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0J50_03060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AMO39768
LinkDB
All DBs
Position
complement(627575..628399)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETTKTSLFPLLNQKVLSVEVRNPSLRWPIPDDVQKLVGQRLIGLNRRSKYILA
EFEQDQMLWHLGMSGSFRLTEPNDELRKHDHLIIQFEDQQLRYHDPRRFGCILWLNHETQ
GKLIDTLGPEPLSPDFHAEYLASKLKNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIH
PAQPVGDLSMQQIEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYFQQTLLAYGRAGE
MCVNCETTLENLKLGQRASVFCPECQPLKKLRKP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacccgaagtcgaaaccaccaaaaccagtttatttcccttattgaatcaa
aaagttcttagtgttgaagtacgtaatcctagcttacgctggcctataccagatgatgtt
cagaaacttgtcggacaacgtctcatcgggttaaatcgacgttcaaaatatattttggca
gagtttgaacaagatcaaatgctttggcatttaggtatgtcaggaagctttcgtctgacc
gagccaaatgatgaactgagaaagcatgatcatctgattattcaatttgaagatcagcaa
ttacgttaccatgaccctcgccgttttggttgtattctttggcttaaccacgagactcaa
ggcaaactcatagatactttagggcctgaacctttaagtcccgactttcatgcggaatat
ttagcttcaaaactcaaaaataagtctgtcggcataaaaattgcactcatggataatcat
gtagttgttggtgtaggcaatatctatgcaactgaaagcttatttaatgttggtattcac
ccagcacagcccgttggtgacttaagcatgcaacaaattgagaaacttgttgtcgagatt
aagcgcattttaaagtcggccattgatctaggtggctctacattacgagactacagcaat
gccatgggtgaaaatggttatttccaacaaacattactcgcttatggccgtgctggagaa
atgtgtgttaactgtgaaaccacattagaaaacttaaaacttggtcagcgtgccagcgta
ttttgcccagagtgccaaccgcttaaaaagctgagaaagccttaa
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