Acinetobacter sp. DUT-2: A0J50_09130
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Entry
A0J50_09130 CDS
T04353
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acw
Acinetobacter sp. DUT-2
Brite
KEGG Orthology (KO) [BR:
acw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acw03016
]
A0J50_09130
Enzymes [BR:
acw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A0J50_09130
Transfer RNA biogenesis [BR:
acw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A0J50_09130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AMO40795
LinkDB
All DBs
Position
complement(1950816..1951940)
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AA seq
374 aa
AA seq
DB search
MFQFIQQQTELVDVLQKMDQCSIYGLDTEFIKVDTLWPKLGVCQVNVNGDVYLLDGVSLD
LSQFWKKIFLAQQNIFHACGEDIDLIYHYADQEDLLNVFDTQVGLSFLGHGLQVSYQGAL
KLCLDIDIEKDQTRSDWLARPLSPQQLCYAANDVLYLMKLASHIQEQLKQKGLYNYVLED
CSSLTKEIISETPNELLYTDVGNYRHSRRQLMQLQNLSEWREYIVKATNQPRSFILRNST
MIDMVEKNPRNSFQLSQVKDIRPNVVREYGKTILELLKDLPVESRWPSKIAKPFKVTSKE
TLNKMDMVLAHAINETSIPKEVLLRKKWLNAIHQHVLCQGDEQDLPDYLLGWRYELLTQP
LIQLFQEEKQSLSI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtttatccaacagcaaaccgaattggttgatgttcttcaaaaaatggatcaa
tgttcaatatatggacttgatacagaatttattaaggttgacacactctggcctaaactt
ggagtatgccaagtcaatgtaaatggtgatgtctatctgttggatggtgtttcattagat
ctaagccagttttggaaaaagatcttcctcgcacagcaaaacatttttcatgcatgtgga
gaagatattgatttaatctatcattatgctgatcaagaagatttgcttaatgtgtttgat
actcaagtgggtctttcttttttaggtcatggcctgcaggtgagttaccaaggtgcttta
aaactttgtcttgatattgatattgaaaaagatcaaaccagatctgattggttagctaga
cctttatcacctcaacaactttgttatgctgctaatgatgttctatatctaatgaagtta
gctagtcatattcaagaacagcttaagcagaaagggctttataactatgttcttgaggac
tgtagtagtctaactaaagaaatcattagtgaaacccctaacgaattactatatacagat
gtgggaaattatcgtcattcacgtcgtcagttaatgcaattacaaaatttaagcgagtgg
cgtgaatacattgtgaaagcaacgaatcagccacgtagttttattcttagaaactcaact
atgattgatatggttgaaaagaacccacgcaatagctttcaactgtcgcaagtgaaagat
attcgtccaaatgtggttcgcgagtacggcaaaacgattttagaacttcttaaagatttg
ccagtcgaaagcagatggccatcaaagattgcaaaaccatttaaggttacgtctaaagag
actttaaataaaatggatatggtgcttgctcatgcaataaatgagacttctattcctaaa
gaagtgttgttgagaaaaaaatggttaaacgccattcatcaacatgttctatgtcaaggg
gatgaacaggatttacccgactatctgttaggatggcgttatgagttattaacgcaacca
ttaatccagttgtttcaagaggaaaaacaaagtttatctatttaa
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