Acinetobacter sp. DUT-2: A0J50_15685
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Entry
A0J50_15685 CDS
T04353
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acw
Acinetobacter sp. DUT-2
Pathway
acw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0J50_15685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acw03019
]
A0J50_15685
03016 Transfer RNA biogenesis [BR:
acw03016
]
A0J50_15685
Enzymes [BR:
acw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A0J50_15685
Messenger RNA biogenesis [BR:
acw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A0J50_15685
Transfer RNA biogenesis [BR:
acw03016
]
Prokaryotic type
tRNA degradation factors
A0J50_15685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
S1_2
KH_PNO1_2nd
SGM_5486
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
AMO41940
LinkDB
All DBs
Position
complement(3342073..3344166)
Genome browser
AA seq
697 aa
AA seq
DB search
MSMFNIVRKEFQFGQHQVVLETGRVARQANTVLITMGGVTVLVAVVAQPKAKAGQDFFPL
TVNYQEKQYAAGRIPGGYGKREGRASEAETLISRLIDRPIRPLFPEGYFNEIQVTATVVS
SDKTMDADIAAMLGTSAALSIAGTPFRGPIGGARVGLINGEYVLNPNFEQLKESDLDLVV
AGTESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAIQAIKEFAAAAGAVESTWVAPTKN
EALLEQLKAAFEAKISEAYTIAVKQDRYAALDALYAEAVAQFVPENDETGIADEVNELFE
DLKYRTVRDNILSGKPRIDGRDTKTVRAIDVQVGVLDRAHGSALFTRGETQALVTTTLGN
TRDALMVDTLAGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAA
DRFPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVL
SDILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAFAGRMHILNEMN
KVISRARAEISAHAPTFEVININPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVF
GETKAAAKAAIAKIQAITAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNER
IANVTDVLKEGQEVKVQVADVDNRGRIKLTMKDIEQA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtttaatatcgttcgtaaagaattccaattcggtcaacatcaagtcgtttta
gaaacgggtcgcgttgcacgtcaagcaaacacagttttaatcactatgggtggcgtaact
gttttagttgcagttgttgctcagcctaaagcaaaagcgggtcaagacttcttcccgtta
acagtgaactatcaagaaaaacaatatgcagctggtcgtatccctggtggttacggtaag
cgtgaaggtcgtgcttctgaagctgaaactttaatttcacgtcttattgaccgtccaatt
cgtccgttgttcccagaaggttacttcaacgaaatccaagtaacagcaacagttgtttct
tctgacaaaactatggatgctgacattgcagcaatgcttggtacatcagcagcattatct
attgctggtactcctttccgtggtccaattggtggtgcacgtgttggtttaatcaacggt
gaatatgttcttaacccgaacttcgaacagttgaaagaaagtgaccttgaccttgtggtt
gcaggtacagaatctgctgtattgatggttgaatctgaagcgaaagaactttcagaagac
caaatgcttggtgctgttcttttcggtcatgacgaaatgcaaatcgcaattcaagcgatt
aaagaatttgctgccgctgctggtgctgttgagtcaacttgggttgctccaactaaaaac
gaagctcttcttgagcaattaaaagcagctttcgaagcgaaaatctctgaagcatataca
attgcggttaaacaagatcgttatgcagcacttgatgcactttatgcagaagctgtagct
cagttcgttccagaaaatgacgaaactggtattgctgatgaagtaaacgaattattcgaa
gaccttaaataccgtacagtacgtgacaacatcttgtcaggtaagccacgtatcgatggt
cgtgatactaaaactgttcgtgctatcgacgttcaagttggcgtattagatcgtgcacac
ggttctgcattgtttacacgtggtgaaactcaggcgttggtaacaacaactttgggtaat
actcgtgatgcgttaatggttgatacccttgctggtactaaaactgacaacttcatgttg
cactataacttccctgcatactctgtaggtgaaacaggccgtgaatctggtcctaagcgt
cgtgaaattggtcacggtcgtttagcacgtcgtggtgttcaagcagttcttcctgctgct
gaccgcttcccgtatgtaattcgtattgtatctgacattactgaatctaacggttcatct
tcaatggcttctgtatgtggtgcttcattatcacttatggatgcaggtgttccgcttaaa
gcaccagttgctggtatcgcaatgggcttagtgaaagaaggcgagcgtttcgcagtactt
tctgacatcttgggtgatgaagatcacttaggtgatatggactttaaagtagcaggttct
gcaaacggtattactgcgcttcaaatggacatcaagattgaaggtattactgaagaaatc
atggaagttgcattaaaccaagcatttgctggtcgtatgcacatcctaaacgaaatgaat
aaagtcatttcacgtgctcgtgctgaaatcagtgctcatgcaccgacgtttgaagtgatt
aacattaacccagacaagatccgtgatgttattggtaaaggcggcgcaactatccgtcaa
attactgaagaaactaaagctgcaattgatatcgaagacaatggtacagttcgcgtattt
ggtgaaactaaagctgctgctaaagctgcaattgctaagattcaagcaattactgctgaa
gttgaaccaggtaagatctatgacggtaaagtaatccgtatcgtagaattcggtgcgttt
gtaaatatcatgccgggtactgatggtcttcttcacatttcgcaaatttcaaatgaacgt
attgcgaacgtaactgatgttcttaaagaaggtcaggaagtgaaagtacaagttgctgat
gttgataatcgtggtcgtatcaaattgactatgaaagacattgaacaagcataa
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