Acinetobacter sp. DUT-2: A0J50_15700
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Entry
A0J50_15700 CDS
T04353
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acw
Acinetobacter sp. DUT-2
Pathway
acw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A0J50_15700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acw03400
]
A0J50_15700
Enzymes [BR:
acw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A0J50_15700
DNA repair and recombination proteins [BR:
acw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A0J50_15700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
AAA_11
UvrD-helicase
Viral_helicase1
Helicase_RecD
SLFN-g3_helicase
ResIII
AAA_22
Herpes_Helicase
PhoH
DEAD
nSTAND3
PIF1
AAA
T2SSE
AAA_16
Flavi_DEAD
AAA_28
ABC_tran
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMO41943
LinkDB
All DBs
Position
complement(3346897..3348648)
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AA seq
583 aa
AA seq
DB search
MDNLNSPEQADLSWLTTWSNFLNQAPFTEQSQVPEATSYLQQLIEASLQGDSCIDVSSEQ
IAALGQLAISADQATLKVAPCVYDEQGLALYRYWHLEQRLAEQICRLKQQLIQPVSCDDY
LDLLTDPHQQAALQMVARQSLSIITGGPGTGKTYTLARIIAVLSQAIPHIRVAMAAPTGK
AAQRMQEALQNSFNDPKLLESGLVSEELRNQGTQTIHRLLGMGHSQTPRFNQKQPLPYDV
IVVDEASMLDLNLATLLFEAVPESCRIILLGDANQLASVDVGAVLADLQQIQALADNRVQ
LQTSRRFAEGALIGQVAKFIQAQTYQQDHAAVLQQFEIDIVEVSELKPIVLQSDMPDVVQ
LEYLPEGNLLDLDTYYQKLMLGFQGYVQSLKNYLKEERSIEQVQNVVKAFDDYRILTAVR
HGPFGLQQLNQYAQRWLQQQLSIVTAGGWYVGRPVMMTYNDYQLGISNGDIGLCFEHRTQ
PQQFEVYFPSLNKWVAANRLPKSIQSAFALTIHKSQGSEFTHTAVVLDQTAKNLLSQELI
YTAITRAKKVVSLLVHQEALLQAFTVRTTRKSGLVQKVNRLVR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatctaaacagccctgaacaagccgatttaagttggttaacaacgtggagtaac
ttcttaaatcaggctccatttactgaacaatcgcaagtaccagaagccacttcttacttg
cagcagcttattgaagcgagcttacaaggcgatagctgtatcgatgtcagttcagagcaa
attgcagcacttggtcagcttgctatatctgccgatcaagcaaccttaaaagttgcgccg
tgtgtctacgatgagcaggggttggcattataccgatattggcacctagagcaacgactt
gcagaacaaatttgtcgattaaagcaacaattaattcaacctgtctcttgtgatgactat
ttagacctgcttaccgatcctcatcaacaggcagctttacaaatggttgctcggcagagc
ctgagtattattaccggtgggccgggtacaggtaagacttatacgctggcacgtattatt
gctgtacttagccaagcaattccacatattcgtgtagcgatggctgctccaacaggtaaa
gcagcacagcgaatgcaagaagctttacagaactcgtttaatgatcctaaattgcttgag
tccggattagttagtgaagagctcagaaatcagggaacacaaacgattcaccgtttgttg
gggatgggacatagccagacaccacggtttaatcaaaaacagcctttgccttatgatgtg
attgtcgtcgatgaagcttccatgctggatctaaatctggctactcttctattcgaagca
gtgcctgagtcttgtcgaattattttattaggagatgcaaatcagcttgcttctgtcgat
gttggcgcggttcttgcagatttgcagcaaatacaggcgttggctgataaccgagtacaa
ttacaaaccagtcgtcgttttgctgaaggtgcattgattggacaagtggctaaatttatt
caggcacaaacctatcaacaggatcatgcagctgttttgcagcagtttgaaattgatatt
gttgaggtttcagaattaaagcctatagttttacaaagtgacatgccagatgtggttcag
cttgagtatttaccagaagggaatctattagacctagatacctattatcaaaagctaatg
ctcggttttcaagggtatgtacagagtctaaaaaattatttaaaagaagagcgctcgatt
gaacaagtccaaaatgtagtaaaagcatttgatgactaccgaattttaaccgcggttcgt
catggtccgtttggattgcagcagttaaaccaatatgcgcagcgttggttgcaacagcaa
ctttcaatagtgacagcagggggatggtatgttggtcgtcctgtaatgatgacttataac
gattatcagctcggtatttcaaatggcgatattggtttgtgctttgagcacagaactcag
ccacagcagtttgaagtatattttccaagtttgaataaatgggtcgctgcaaatcgatta
cctaaaagtattcaaagtgcattcgctttaacgattcataaatcgcaagggtctgaattt
acacacactgctgtcgttttagatcagactgccaagaacttattaagccaagaacttatt
tacactgcgattacacgagctaagaaggtagtcagtcttttagtgcatcaagaggcttta
ttacaagcatttacagttcgtactacacgaaaaagcggtttagttcaaaaagttaatcgg
ttagttcgttaa
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