Azotobacter chroococcum: Achr_10870
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Entry
Achr_10870 CDS
T03640
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acx
Azotobacter chroococcum
Pathway
acx03410
Base excision repair
acx03430
Mismatch repair
acx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Achr_10870 (recJ)
03430 Mismatch repair
Achr_10870 (recJ)
03440 Homologous recombination
Achr_10870 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acx03400
]
Achr_10870 (recJ)
DNA repair and recombination proteins [BR:
acx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Achr_10870 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Achr_10870 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Achr_10870 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AJE20568
UniProt:
A0A0C4WH22
LinkDB
All DBs
Position
1199468..1201180
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AA seq
570 aa
AA seq
DB search
MRIEPRPLPERLPALGDLPPLLTRLYAARGVQSAAELDKGLARLLPFRQLKGIETAVELL
VEALHERRRILFVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALERRPELLVTVDNGISSLDGVAAAKAAGLRVLVTDHHLPGRELPAADAIVNPNQPGCDF
SSKAMAGVGVIFYVLLALRARLRELGWFAGPRSEPNLAELLDLVALGSVADVVPLDANNR
ILVHQGLARIRAGRARPGLCALLEVAGRDYRRITSTDLGFILGPRLNAAGRLDDMSLGIE
CLLCEDEGLARDMAVQLDQLNQDRKAIEQGMQREALAQLKELPVEELPFGLCLFEPDWHQ
GVIGILASRLKERYHRPAIAFADAGDGLLKGSARSVPGFHIRDALDAVAAGHPGLISKFG
GHAMAAGLSLPEENFTAFAAAFDAEVRRQLCADDLTGRLLSDGQLGVEEFHLDLARALRQ
AGPWGQHFPEPLFHGMFQVVQQRLVGERHLKLVVRSECGALQLDAIAFNIDREQWPDPTV
RWVELAYRLDVNEYRGQESVQLVVVHLEAR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgcccgctgcccgaacgactgcccgcgctgggcgacctgccgccg
ctgctgacccgcctctacgccgcccgcggcgtgcagtccgcggccgaactggacaagggg
ctggcacggctgctgcccttccgccagctcaagggcatcgagacggcggtggagctgctg
gtcgaggcgttgcacgagcgccggcgcatcctcttcgtcggcgacttcgacgctgacggc
gccaccgccagcacggtcggcgtgctcggtctgcgcctgctcggcgcggcgcatgtcgac
tacctggtgccgaaccgcttcgagtacggctacgggctgacccccgagatcgtcgccgtg
gccctggagcgccggccggagctgctggtgacggtggacaacgggatctccagcctcgat
ggcgtagccgcggccaaggctgccggcctgcgcgtgctggtcaccgaccaccacctgccg
ggccgcgagctgccggcggcggacgccatcgtcaatcccaaccagccgggctgcgatttt
tccagcaaggccatggccggcgtcggggtgatcttctacgtgctgctggcgctgcgcgcc
cggctgcgcgagctgggctggttcgccgggccgcggagcgagccgaacctggccgagctg
ctcgatctggtcgccctgggcagcgtcgccgacgtggtgccgctggacgccaacaaccgc
atcctggtccaccaagggctggcgcgcatccgtgccggacgggcgcggccggggctgtgc
gcgctgctcgaggtggccggccgcgactaccggcggatcacctccaccgatctcggcttc
attctcggaccgcggctgaacgccgccgggcggctcgacgacatgtccctcggcatcgaa
tgcctgctctgcgaggacgaggggctggcccgcgacatggcggtacagctcgaccagctc
aaccaggaccgcaaggccatcgagcagggcatgcagcgcgaggcgctggcccagctcaag
gagctgccggtcgaggagttgcccttcggcctctgtctgttcgagccggactggcaccag
ggggtgatcggcatcctcgcctcgcgcctcaaggagcgctatcaccgtccggccatcgcc
ttcgccgatgcgggcgacggcctgctcaagggctcggcgcgctcggtgccgggcttccac
atccgcgatgcgctggatgcggtggcggccggccatccggggctgatcagcaagttcggc
gggcatgcgatggccgccgggctgtcgctcccggaggagaacttcactgccttcgccgcc
gccttcgacgccgaggtgcgccgccagctctgcgccgacgatctgaccgggcggctgctc
tccgacggccagctcggcgtcgaggagttccatctcgatctggcccgcgccctgcgccag
gccggcccctggggccagcattttcccgagccgctgttccatgggatgttccaggtcgtt
cagcagcgcttggtcggcgagcgtcatctgaagctggtggtgcgcagcgagtgcggcgcg
ctgcagctcgatgccatcgccttcaacatcgaccgcgagcaatggccggaccccacggtg
cgctgggtcgagctggcctaccggctggacgtcaacgaataccgcgggcaggagagcgtg
cagctggtggtggtgcatctcgaggcccgctga
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