Azotobacter chroococcum: Achr_16550
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Entry
Achr_16550 CDS
T03640
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acx
Azotobacter chroococcum
Pathway
acx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Achr_16550 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acx03019
]
Achr_16550 (recQ)
03400 DNA repair and recombination proteins [BR:
acx03400
]
Achr_16550 (recQ)
Enzymes [BR:
acx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Achr_16550 (recQ)
Messenger RNA biogenesis [BR:
acx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Achr_16550 (recQ)
DNA repair and recombination proteins [BR:
acx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Achr_16550 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HTH_29
Sigma70_r4_2
DUF433
GerE
Motif
Other DBs
NCBI-ProteinID:
AJE21112
UniProt:
A0A0C4WS62
LinkDB
All DBs
Position
1816121..1818244
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AA seq
707 aa
AA seq
DB search
MLEQAQRILKDVFGYDAFRGNQAAIIERVARGGDALVLMPTGGGKSLCYQVPALLRGGLA
VVVSPLIALMEDQVATLDELGVPAVALNSTLGADEQREIAERIRLGEIKLLYLAPERLVQ
PRMLAFLQRLPIGLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPQVPRIALTATADKRT
REEIVQRLHLESAERFLSSFDRPNIFYRIVAKDQPRKQLLGFLAERRGDAGIVYCMSRKK
VEETAAFLSEQGFPALPYHAGLSNELRALHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLSSSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEELAKPCGHCDNCVDGVQTWDATEAARQALSTIYRSG
QRYGVGHLVDILLGRDNDKVRSLGHQHLSVFGVGKAHGEGEWRTLFRQLVARGLADVDLD
GYGGLRLNQSCRALLRGEMSLELRRDLKPQAPKPAASAASQLVRHDEREQWEALRALRRK
LAEEHAVPPYVIFPDATLLEMLRSQPRSLSEMARVSGVGARKLERYGEAFLEVLNKAGEA
PKPVTDLRHELVSLARAGMTPAQIAHQLDCTEKNVYSLLAEAIGRRQLTLEQALDLPEEL
LGEIHDAFLDGDGELPPVAALADQFAGRVPQGVLHCVRAALQAELDH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcattctcaaggacgtctttggttacgacgcgttccgtggc
aaccaggcggcaatcatcgagcgcgtcgcccgcggcggcgacgccctggtgctgatgccg
accggcggcggcaagtcgctctgctatcaggttccggccctgctgcgcggcgggctggca
gtggtggtttcgccgctgatcgcactgatggaggaccaggtcgccaccctcgacgagctg
ggggtgccggcggtggcgctgaactccacgctgggtgccgacgagcagcgcgagatcgcc
gagcggatccgtctgggcgagatcaagctgctctatctggccccggagcgcctggtgcag
ccgcgcatgctggccttcctgcagcgcctgccgatcggtctgttcgccatcgacgaggcg
cattgcgtatcccagtgggggcatgacttccgccccgaatacctgcagctgggccagctc
gccgagctgttcccgcaagtgccgcgcatcgccctgaccgccacggcggacaagcgcacc
cgcgaggaaatcgtccagcgcctgcatctggaaagcgccgaacgctttctctccagcttc
gatcggccgaacatcttctaccgcatcgtcgccaaggatcagccgcgcaagcagctgctc
ggctttctcgccgagcgtcgcggcgacgccggaatcgtctactgcatgtcgcgcaagaag
gtcgaggaaaccgcggccttcctctccgagcagggttttccggcgctgccgtaccacgcc
gggctgtccaacgagctgcgcgccctccaccagaaacgcttcctcaacgaggagggcctg
atcatggtggcgaccatcgccttcggcatgggtatcgacaagcccaacgtgcgcttcgtc
gcccacctcgacctgcccaaatcgctggaggcctactatcaggaaaccggccgggccggg
cgcgacggcctgccggcggacgcctggatggcctacggcctgcaggacgtcatctttctc
aagcagatgctcagcagttccgagggcgacgagcggcacaaacgcgtcgagcagcacaag
ctcgacgccatgctggcgctgtgcgaggaaacccgctgccgccgccaggcgctgctggcc
tatttcgacgaggagttggcaaagccctgcggccactgcgacaactgcgtcgacggcgtg
cagacctgggatgccaccgaggccgcccgccaggcgctgtcgaccatctaccgcagcggc
cagcgctatggcgtcggtcatctggtggacatcctgctcggccgcgacaacgacaaggtg
cgcagcctgggccatcagcacctgtcggtgttcggcgttggcaaggcgcacggcgaaggg
gagtggcgcacgctgttccgccagctggtcgcccgcggcctggccgatgtggatctggac
ggctatggcggcctgcgtctgaaccagagctgccgggcgctgctgcgcggcgagatgagc
ctggagctgcgccgcgatctcaagccacaggcgccgaagcctgcggccagcgccgccagc
cagctggtccgccacgacgagcgcgagcagtgggaggcgctgcgcgcgctgcgccgcaag
ctggcggaggagcacgcggtgccgccctatgtgatcttccccgacgctaccttgctggaa
atgctgcgcagccagccgcgctcgctgtccgagatggcgcgggtcagcggtgtcggcgcg
cgcaagctggagcgctatggcgaggccttcctcgaagtgctcaacaaggctggcgaggcg
ccgaagccggtgaccgacctgcgccacgagctggtcagcctggcccgcgccggcatgacg
ccggcgcagatcgcccaccagctggactgtaccgaaaagaacgtctatagcctgctggca
gaggccatcggccgccgtcagctcaccctcgagcaggcgctggacctgcccgaggaactg
ctgggcgaaatccacgatgccttcctcgacggcgatggcgagctgccgccggtcgcagcg
ctggccgatcagttcgctgggcgggtgccgcagggggtgctgcactgcgtgcgtgcggcc
ttgcaggctgaactcgatcattga
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