Azotobacter chroococcum: Achr_27410
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Entry
Achr_27410 CDS
T03640
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acx
Azotobacter chroococcum
Pathway
acx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Achr_27410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acx03019
]
Achr_27410
03009 Ribosome biogenesis [BR:
acx03009
]
Achr_27410
Enzymes [BR:
acx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Achr_27410
Messenger RNA biogenesis [BR:
acx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Achr_27410
Ribosome biogenesis [BR:
acx03009
]
Prokaryotic type
rRNA helicases
Achr_27410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AJE22164
UniProt:
A0A0C4WNM0
LinkDB
All DBs
Position
complement(3097533..3099221)
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AA seq
562 aa
AA seq
DB search
MTQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAF
ALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGGAPMGPQLK
ALRQGAQIVVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMDDLEVIFAALPES
RQTVLFSATLPHSIREIAEKHLREPQHVKIAAKTQTVARIDQAHLMVHADQKTAAVLRLL
EVEEFDALIAFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV
ATDVAARGIDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVI
ERVTGQKVAEVHLPNAQQVLDARIRKLTASLQPLLAEAEASHGELLDRLTAELDCSPRAL
ASALLRKATNGQGLTLAEVEREQPLVPGVAVPRERRERSERAPERGERSSVHRERRAPMP
LPEGRVRCRAALGARDGIAAKNLLGAILNEGGLARDSIGRIQVRDSFSLIELPEDGLERL
LGKLRDTRVAGKQLKLRRYRED
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggagaccggcggcttcgccgcactcggcattcatcccgctgtactcgccgcc
atcaccgcggtgggctacgaagagccatcccccatccaggcccaggcgatcccggtgatc
cttgccggccacgacatgatcggccaggcccagaccggcaccggcaagaccgccgccttc
gccctgccgatgttgtcgcgcatcgacccggcgcgccgcgagccgcagttgctgatcctc
gcgccgacccgcgagctggccctgcaggtggccaccgccttcgagacctatgccagccag
ctgcccggtgtcggcgtggtggcggtctacggcggcgcgccgatgggtccgcagctgaag
gcgctgcgccagggcgcgcagatcgtggtagccacccccggccgcctgtgcgaccacctg
cgtcgcgacgagcagctgctctccaccgtgaagcacctggtgctcgacgaggccgacgag
atgctcaagctcggcttcatggacgatctcgaggtgatcttcgccgccctgccggaaagc
cgccagaccgtgctgttctccgcgaccctgccgcactcgatccgcgagatcgccgagaag
cacctgcgcgagccgcagcacgtcaagatcgccgccaagacccagaccgtggcgcgcatc
gaccaggcccacctgatggtccacgccgaccagaagaccgccgccgtgctgcgcctgctg
gaggtcgaggagttcgacgcgctgattgccttcgtgcgcaccaagcaggccactctggac
ctggccagcgccctcgaggccaagggctacaaggccgccgcgctgaacggcgacatcgcc
cagaaccagcgcgagcgggtcatcgaatcgctcaaggacggccgcctggacatcgtcgtc
gccaccgacgtggccgcccgtggcatcgacgtgccgcgcatcacccacgtgttcaacgtc
gacatgccctacgacccggagtcctacgtgcaccgcatcggccgtaccggccgggccggt
cgcgacggccgtgccctgctgctggtgacgccgcgcgagcggcgcatgctgcaggtgatc
gagcgggtcaccgggcagaaggtcgccgaggtgcacctgcccaacgcccagcaggtgctg
gacgcgcgcatccgcaagctgaccgccagcctgcagccgctgctggccgaggccgaagcc
agccacggcgagctgctcgaccgcctgaccgccgagcttgactgcagcccgcgcgccttg
gcgtcggccctgctgcgcaaggccaccaacggccaggggctgaccctggccgaggtcgag
cgcgagcagccgctggtgccgggcgtggcggtgccgcgcgagcgccgtgagcgcagcgag
cgtgcccccgagcgtggcgagcgcagcagcgtgcaccgcgaacggcgtgcgccgatgccc
ctgccggaaggccgggtccgctgccgtgccgcgctgggcgcgcgcgacgggatcgccgcg
aagaacctgttgggcgcgatcctcaacgaaggcggcctggcccgcgactccatcggccgc
atccaggtccgtgacagcttcagtctgatcgagctgccggaagatggcctcgagcgcctg
ctcggcaagctgcgcgacacccgcgtggccggcaagcagctgaagctgcgccgctatcgc
gaggactga
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