Azotobacter chroococcum: Achr_28370
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Entry
Achr_28370 CDS
T03640
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acx
Azotobacter chroococcum
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acx03032
]
Achr_28370 (topA)
03400 DNA repair and recombination proteins [BR:
acx03400
]
Achr_28370 (topA)
Enzymes [BR:
acx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Achr_28370 (topA)
DNA replication proteins [BR:
acx03032
]
Prokaryotic type
DNA Topoisomerases
Achr_28370 (topA)
DNA repair and recombination proteins [BR:
acx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Achr_28370 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Ribosomal_L10
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AJE22259
UniProt:
A0A0C4WNU6
LinkDB
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Position
complement(3188326..3190932)
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AA seq
868 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSQYVVKSSIGHIRDLPTSGSASTAREPAKRGKSTAEAP
ALSPKEKAKRQLFARMGVDPEHGWKAHYEILPGKEKVVDELRRLAQEADTIYLATDLDRE
GEAIAWHLRESIGGDDSRYKRVVFNEITKKAIQEAFAQPGELDINRVNAQQARRFLDRVV
GYMVSPLLWQKIARGLSAGRVQSVAVKLIAEREREIRAFIPEEFWEIHADLGTAKGAQVR
FEVARENGEAFRPLNEAQALAALEKLKASSYRVAKREDKPTRSKPSAPFITSTLQQAASN
RLGFSVKKTMMMAQRLYEAGYITYMRTDSTNLSADALEMARGFIEGEFGAQYLPAQPNLY
TSKEGAQEAHEAIRPSDVNLQPTQLSGMERDAERLYELIWRQFVACQMPPAEYLSTSVSV
QAGAFELRAKGRILKFDGYTRVLPQLAKPGEDDVLPAMAEGESLDLLKLDPSQHFTKPPA
RYSEASLVKEMEKRGIGRPSTYAAIISTIQERGYVTLQNRRFHSEKMGDIVTERLAESFA
NLMDYGFTASMEEHLDDVAQGERDWKHLLDEFYGDFRKKLDIAESSEAGMRANQPTLTDI
PCRECGRPMMIRTASTGVFLGCSGYSLPPKERCKSTINLIPGDEIAADDEGESESLLLRN
KRRCPKCGTAMDAYLLDEQHKLHICGNNPDCSGYEIEEGQYRIKGYEGPSLECDKCGSQM
QLKTGRFGKFFGCTNAACKNTRKLLKSGEPAPPKMDAVKMPELRCEKVDDVYVLRDGASG
LFLAASQFPKNRETRAPLVLELLPHRDEIDPKYHFLLDAPAKDPEGRPAVIRYSRKSKEQ
YVQSEVEGKPSGWRAFYQDGRWVVEDKR
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcagccagtacgtggtgaagtcgagcatcggccatatccgtgacctgcccaccagc
ggctcggccagtaccgccagggagccggccaagcgtggcaagagcacggccgaggcgccg
gcgctgtcgcccaaggagaaggccaagcgacagctgttcgcgcgcatgggggtcgatccc
gaacacggctggaaggcccactacgagatcctgccgggcaaggagaaggtggtcgacgaa
ctgcgccgcctggcccaggaagccgacaccatctatctggccaccgacctggaccgcgag
ggggaggccatcgcctggcacctgcgcgagtccatcggcggcgacgacagccgctacaag
cgcgtggtgttcaacgagatcaccaagaaggcgatccaggaggccttcgcccagccgggc
gagctggacatcaaccgggtcaatgcgcagcaggcgcggcgcttcctcgaccgggtggtc
ggctacatggtttcgccgctgctctggcagaagatcgcccgcgggctgtccgccggccgc
gtgcaatcggtggcggtgaagctgatcgccgagcgcgagcgggagatccgcgccttcatc
ccggaggagttctgggagatccatgccgacctgggcaccgccaagggcgcccaggtgcgc
ttcgaggtggccagggagaacggcgaggccttccgcccgctcaacgaggcccaggcgctg
gccgcgctggagaagctcaaggcctccagctaccgggtggccaagcgcgaggacaagccg
acccgcagcaagccctcggcgcccttcatcacctcgaccctgcagcaggcggcgagcaac
cgtctgggcttctcggtgaagaagaccatgatgatggcccagcgcctgtacgaggccggc
tacatcacctacatgcggaccgactcgaccaacctctcggccgatgccctggagatggcg
cgcggtttcatcgaaggcgagttcggcgcgcagtacctgcccgcacagcccaatctctac
accagcaaggagggcgcccaggaggcccacgaggcgatccgcccctccgacgtcaacctg
cagccgacccagctgtccggcatggagcgcgacgccgagcggctctacgagctgatctgg
cgccagttcgtcgcctgccagatgccgccggccgaatatctgtcgaccagcgtcagcgtc
caggccggcgccttcgagctgcgcgccaagggccgcatcctcaagttcgacggctacacc
cgcgtgctgccgcagctggccaagcccggtgaagacgacgtactgccggccatggccgag
ggcgagagcctcgacctgctcaagctcgaccccagccagcacttcaccaagccgccggcg
cgctacagcgaggccagcctggtcaaggagatggaaaagcgcgggatcggccggccctcc
acctatgcggcgatcatctccaccatccaggagcgcggctacgtgaccctgcagaaccgc
cgcttccattccgagaagatgggcgacatcgtcaccgagcgcctcgccgagagtttcgcc
aacctgatggactacggcttcaccgccagcatggaggagcatctggacgacgtggctcag
ggcgagcgcgactggaagcacctgctcgacgagttctacggcgacttcaggaagaagctg
gacatcgccgagtccagcgaggcgggcatgcgcgccaaccagccgaccctgaccgacatt
ccctgccgtgaatgcggccggccgatgatgatccgcactgcctcgaccggcgtgttcctc
ggttgctcgggctacagcctgccgcccaaggagcgctgcaagtcgaccatcaacctgatc
ccgggcgacgagatcgccgcggacgacgagggcgagtccgagtcgctgctgctgcgcaac
aagcgccgctgtccgaagtgcggcacggcgatggacgcctatctgctcgacgagcagcac
aagctgcacatctgcggcaacaatccggactgctccgggtacgagatcgaggaaggccag
taccggatcaagggctacgagggcccgagcctggaatgcgacaagtgtggcagccagatg
cagctcaagaccggccgcttcggcaagttcttcggctgtaccaacgccgcctgcaagaac
acccgcaagctgctgaagagcggcgagccggcgccgccgaagatggatgcggtgaagatg
ccggagctgcgctgcgagaaggtcgacgacgtctatgtgctgcgcgacggcgcctccggc
ctgttcctcgccgccagccagttcccgaagaaccgcgagacccgcgcgccgctggtcctg
gagctgctcccgcaccgggacgagatcgacccgaagtaccacttcctgctggatgctccg
gccaaggacccggaaggccgcccggcggtgatccgctacagccgcaagagcaaggagcag
tacgtgcagagcgaggtcgagggcaagcccagcggctggcgcgccttctaccaggacggc
cgctgggtggtcgaggacaagcgctga
DBGET
integrated database retrieval system
