Azotobacter chroococcum: Achr_29990
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Entry
Achr_29990 CDS
T03640
Symbol
cafA
Name
(GenBank) Cytoplasmic axial filament protein CafA and Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
acx
Azotobacter chroococcum
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acx03019
]
Achr_29990 (cafA)
03009 Ribosome biogenesis [BR:
acx03009
]
Achr_29990 (cafA)
Messenger RNA biogenesis [BR:
acx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Achr_29990 (cafA)
Ribosome biogenesis [BR:
acx03009
]
Prokaryotic type
rRNA processing factors
Achr_29990 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DUF7866
Motif
Other DBs
NCBI-ProteinID:
AJE22412
UniProt:
A0A0C4WUZ8
LinkDB
All DBs
Position
complement(3366143..3367600)
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGRVVRVLPGMQAAFVDI
GLERAAFIHAAEISSREGSAVENIAALVHEGQGLVVQVTKDPIGSKGARLTTHLSIPSRY
LVYMPRTRHVGISLKIEDEAERERLKRVVADCVASEGIEHEGGFILRTAAEGAGADEILA
DIRYLRRLWDQIAGQMQTASAPTVIYEDLSLALRTLRDLVSPRIEKIRIDSRETFQKVSH
FVAELMPEIADRLEHYPGERPIFDLYGVEDEVQRALERKVMLKSGGYLIIDPAEAMTTID
VNTGAFVGHRTLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQVLRTL
EKQLERDHAKTNIIGITVLGLVQMTRKRTRESLEQVLCEPCNCCQGRGKLKTAETICYEI
FREILREARAYQAEGYLVLANQKVVDRLLDEESGNVADLEAFIGRPIKFQVEGTYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagattctgatcaatatcacgccgatggagtcgcgcgtggcggtggtggag
aatggtgtgctgcaggaggtgcacgtcgagcgcacccagcgccgcggcatcgtcggcaac
atctacaagggccgggtggtgcgggtgctgccgggcatgcaggcggccttcgtcgacatc
ggcctggagcgcgccgcgttcatccatgccgcggagatttccagccgcgagggcagtgcg
gtggagaacatcgcggccctggtgcacgaggggcagggcctggtggtgcaggtcaccaag
gatccgatcggcagcaagggggcccggctgaccacccatctgtcgattccctcgcgctac
ctggtctacatgccgcgcacccgccacgtcggcatctccctgaagatcgaggatgaggcc
gagcgcgagcgcctgaagagggtggtcgccgactgcgtggccagcgaagggatcgagcac
gagggcggcttcatcctgcgcaccgctgccgaaggcgccggggccgacgagatcctcgcg
gacatccgctacctgcggcgcctgtgggaccagatcgccgggcagatgcagaccgccagc
gcgccgacggtgatctacgaggatctcagcctggccctgcgcaccctgcgcgatctggtc
agcccgcgtatcgagaagatccgcatcgactcgcgggaaaccttccagaaggtttcgcat
ttcgtcgccgaactgatgccggagatcgccgaccgtctcgagcactatcccggcgagcgg
ccgatcttcgacctgtacggggtcgaggacgaggtccagcgggccctggagcgcaaggtg
atgctcaagtccggtggctacctgatcatcgatccggccgaggcgatgaccaccatcgac
gtcaataccggcgccttcgtcggccatcgcaccctggaagagaccatcttcaagaccaac
ctcgaggcggccaccgcgatcgcccggcagctgcgcctgcgcaacctgggcgggatcatc
atcatcgacttcatcgacatggaggacgaggagcatcagcgccaggtgctgcgtaccctg
gagaagcagctggagcgcgaccacgccaagaccaacatcatcggcatcaccgtgctcggg
ctggtgcagatgacccgcaagcgtacccgggaaagcctcgagcaggtgctctgcgagccc
tgcaactgttgccagggacgcggcaagctgaagacggcggaaaccatctgctacgagatc
ttccgcgagatcctccgggaggcccgcgcctaccaggccgagggctacctggtgctggcc
aaccagaaggtggtcgaccggctgctcgacgaggagtcgggcaacgtcgccgatctcgag
gccttcatcggccggcccatcaagttccaggtcgagggcacctactcccaggagcagtac
gatgttgtcctgctgtaa
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