Azotobacter chroococcum: Achr_30800
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Entry
Achr_30800 CDS
T03640
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acx
Azotobacter chroococcum
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acx03400
]
Achr_30800 (sbcC)
DNA repair and recombination proteins [BR:
acx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Achr_30800 (sbcC)
Archaeal homologous recombinant proteins
Achr_30800 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
ABC_tran
nSTAND3
cobW
ABC_ATPase
AAA_21
AAA_22
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AJE22489
UniProt:
A0A0C4WPE9
LinkDB
All DBs
Position
complement(3449889..3453311)
Genome browser
AA seq
1140 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFREAPFCDNGLFAITGPTGAGKTTLLDAICLALYHRTPR
MDRLSKESNELMTRHTAECLAEVEFEVKGQGYRAFWSQRRARDKADGALQMPRVELAAAD
GTILADKVGDKLARIEALTGLDFARFTRSMLLAQGGFAAFLEADAKSRAELLEQLTGTEI
YGQISRRVFERCREVKSALEQLQARASGVELLSDEQRQALEEQAAGLAAEEAPLLAQQGE
LQAQRQWREDLGRAEQRCQGAAQSRQQAEQALAEATPQLARLAASEPAARLLPAHRAWLQ
ARLQQEQGERSLAQTRIDRQQAAEAVGLRLWQASQLARQIAEAAQGHARQLQLQQRQLVQ
QLAGQPRHAELGERLGVWRGQFERRQQWQGEIAALQRRQQGERAALAELAGQQRQVQTRL
QSQQAELAAARSAEQQAQDALAALLQGQSEGALREHWQQLHARQNLLQQLEQNAEQRSRS
AARLAGSAAELADKQLRQSEQQTQRELLRLRYKDLQALVAARRKLLEQEQRILKLEAYRS
QLQPGEACPLCGSHEHPAVETYQALDVSASERALQAGEAELEAVRGQGEAARDALAVLEA
ELKALQQRREQDEAELLQQRERWRQLCRELGAEVADEAALAMRRSELGEQLEALELRLRR
LERSKQAMEQAGNVRLQQERSCEQGSQQLQLLEERLHSGQSQLQNLDDQLQQRQAQLQQC
EQALAEDLAPFGHPLPTDGAAWLEQRLADWQAWQQGQSRLQQLEREQLAHNAAVEAAEQQ
AALWQQRWSALGEPGRAALAESTDAHVALCNAEAEADAARRRVNELDGRLLSLEEQLQQQ
RRQLEACTGDWQAQLAQSPFADEAAFQAALLDDSERTALQDLRARLEQARTEALALLAAT
EQQLAQLLAEPRTTASGEELERQLQALAEQLRGLAQRQGEIRATLSADEQRRQSQQALFA
EIAARQGEYDLWQHLNGLIGAADGAKYRKFAQGLTLDHLIWLANRQLVRLHGRYQLARRS
GGELELEVLDTWQGDAARDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGT
LDGETLEVALDALDSLNASGKTIGVISHVEALKERIPVQLRVSKGVGLGYSSLERRFALS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaagaacctcaactccctcaagggcgagtggaagatc
gatttccgcgaggcgccgttttgtgacaacggcctgttcgccatcaccgggccgaccggc
gccggcaagaccaccctgctcgacgccatctgcctggccctctaccaccgcacgccgcgc
atggaccgcctgtccaaggagtccaacgagctgatgacccggcataccgccgagtgcctg
gccgaggtggagttcgaggtcaaggggcagggctaccgggccttctggagccagcgccgc
gcccgcgacaaggccgacggcgcgctgcagatgccccgggtcgagctggccgcggcggac
gggaccatcctcgccgacaaggtcggcgacaagctcgcgcggatcgaggcgctcaccggc
ctggacttcgcgcgcttcacccgctccatgctgctcgcccagggcggtttcgccgccttt
ctcgaggccgacgcgaaaagccgtgccgagctgctcgagcagctcaccggcaccgagatc
tacgggcagatctcccggcgggtgttcgagcgctgccgcgaggtgaagagcgccctcgag
cagttgcaggccagggcttccggggtcgagctcttgagtgacgagcagcgccaggccctg
gaggagcaggccgccggcctggccgccgaggaggcgccgctgctggcgcagcaaggcgag
ctgcaggcccagcgccagtggcgcgaggatctgggcagggcggagcagcgctgccagggc
gcggcgcagtcgcgccagcaggccgagcaggcgctggccgaggccacgccgcaactggcg
cggctggcggcgagcgagccggctgcccgcctgctgccggcccatcgggcctggctgcag
gcccggctgcagcaggagcagggcgagcggagcctggcgcagacccgcatcgaccggcag
caggcggccgaggcagtcggcctgcgcctgtggcaggccagccagctcgcccggcagatc
gccgaagcggcgcaggggcatgcccggcagttgcagctgcaacagcggcagctggtgcag
cagctggccggacagccgcggcatgccgagctgggcgagcgcctcggcgtctggcgcggg
cagttcgagcgtcgccagcagtggcagggcgaaatcgccgcgctccagcgcaggcagcag
ggcgagcgggccgcgctcgccgagctggccgggcagcaacggcaggtgcagacgcgcctg
cagagccagcaggccgagctggccgctgcccgctcggccgagcagcaggcccaagacgcc
ctggccgcgctgctgcaggggcagtccgaaggcgcgctgcgcgaacactggcagcagctg
catgcccggcagaacctgctgcagcaactggagcagaacgccgagcagcgcagccgcagc
gcggcgcgcctggccgggagcgccgccgagctggctgataaacagctgcgccagagcgag
cagcagacccagcgggaactcctgcgcctgcgctacaaggacctgcaggccctggtcgcg
gccaggaggaaactgctggagcaggagcagcgcatcctcaagctggaggcctatcgcagt
cagctgcaacctggcgaagcctgcccgctgtgcggctcccacgagcatccggccgtcgag
acctatcaggcgctggacgtttccgccagcgagcgcgccttgcaggccggcgaggcggag
ctggaagcggtgcgcgggcagggggaggcggcgagggatgcactggccgtcctcgaggcc
gaactcaaggccctgcagcagcgccgcgaacaggacgaggccgagctgctgcagcagcgc
gagcgctggcggcagctgtgccgggagctgggcgcggaggtggccgacgaggcggcgctg
gccatgcgccggagcgagctgggcgagcagctggaggccctcgaactgcgtctgcggcga
ctcgagcggagcaagcaggccatggagcaggccggcaacgtccgcctgcagcaggagcgc
agctgcgagcagggcagccagcagctgcaactgctcgaagagcgcctgcacagtggccag
agccagctgcaaaacctggacgatcagttgcagcagcgccaggcgcagttgcagcagtgc
gagcaggccctggccgaagatctcgcccccttcggccatccgctgccgactgatggcgcg
gcctggctcgaacagcgtctggccgactggcaggcctggcagcaggggcagagccgcctg
cagcaactggagcgcgagcagctggcgcacaacgccgccgtcgaggccgcggagcagcag
gccgcgctctggcagcaacgctggagcgccctgggcgagcccgggcgggccgccctggcg
gagagcaccgatgcccacgtcgccctctgcaacgcggaagccgaggcggacgccgcccgg
cgccgggtcaacgaactggacgggcgtctgctgtcgctggaggagcagctgcagcagcag
cgccggcaactcgaggcctgcaccggcgactggcaggcgcagctggcgcaaagccccttc
gccgacgaggcggcgttccaggccgcgctgctcgacgattcagagcgcaccgctctgcag
gacctcagggcgcgtctggagcaggcgcggaccgaggccctggcgctgctcgccgccacc
gagcagcagctcgcccagctactggccgaaccccgcaccacggccagcggcgaggagctg
gagcggcagctgcaggccctggccgagcagctcaggggcctggcccagcgccagggtgaa
attcgcgccacgctgtccgccgacgagcagcgccggcaaagccagcaggcgctgttcgcc
gagatcgccgcgcgtcagggcgagtacgacctctggcagcacctcaacggactgatcggc
gcggccgacggcgccaagtaccgcaagttcgcccagggcctgaccctcgatcacctgatc
tggctggccaaccgccagctggtgcgcctgcacggccgctaccagctggcgcggcgctcc
ggcggcgagctggagctggaggtcttggacacctggcagggcgatgcggcccgtgacacc
cgcaccctgtccggcggcgagagcttcctggtcagcctggcgctggctttggcgctgtcc
gatctggtcagccacaagaccagcatcgactcgctgtttctcgacgaaggcttcggcacc
ctcgacggcgagaccctggaggtcgccctggatgcgctggacagcctcaacgccagcggc
aagaccatcggggtgatcagccacgtcgaggcgctgaaggagcgcattccggtgcagctc
agggtaagcaagggcgtgggcctgggctacagcagcctggaaaggcgcttcgccctgtcc
tga
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