Azotobacter chroococcum: Achr_40090
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Entry
Achr_40090 CDS
T03640
Symbol
recD
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acx
Azotobacter chroococcum
Pathway
acx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Achr_40090 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acx03400
]
Achr_40090 (recD)
Enzymes [BR:
acx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Achr_40090 (recD)
DNA repair and recombination proteins [BR:
acx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Achr_40090 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
SH3_13
Viral_helicase1
Helicase_RecD
AAA_22
UvrD-helicase
AAA_16
AAA_17
SLFN-g3_helicase
PhoH
TraI_hel_assoc_N
Mg_chelatase
AAA_25
AAA_28
T2SSE
ADK
NTPase_1
nSTAND3
AAA_5
ATPase
Motif
Other DBs
NCBI-ProteinID:
AJE23394
UniProt:
A0A0C4WRW5
LinkDB
All DBs
Position
complement(4484841..4486928)
Genome browser
AA seq
695 aa
AA seq
DB search
MSEQLSLLMGEAAPAAELHDAAGLLALLDAWVERGWLRALDRALAGFFRELDDSCPPLAL
LAAALASHQLGHGHVCLDLAATLASPDFALSLPPEGEDAARASLLPSEILAGVELAQWRA
ALAGSRLVALDGAGEEAPLVLSGERLYLRRYWNYERAVAAAIGARLQDAPALPADLSHRL
GQLFPEPLLVDGARQTDWQKLACALAARGSFSLITGGPGTGKTTTVVRLLALLQAPALAA
GQALRIRLAAPTGKAAARLTESIGAQVASLDVDNSVKKAIPSEVTTLHRLLGSLPDSRHF
RHHAGNPLPLDVLVVDEASMIDLEMMACLLAALPRHARLILLGDKDQLASVEAGALLGDL
CRDAEGGFYGADTRAWLEAVGGETLADPALREGDAGRQPLAQRTVMLRHSRRFGSGSGIG
RLARAVNCRDAAGARTILAEGSRDLHVLRLRGEEDAALERLLLGGLPMQDKAKPQGYAHY
LERLREARPAADCPPDHDDWKNWAAAVLKAFDEFQLLCAVRKGPWGVEGLNPRIAAALHR
RGLLEGDQGWYEGRPVLMTRNDYSLGLMNGDIGIALRLPEPDTPAQTVLRVVFPRNDGSD
GLRYILPSRLSAVETVFAMTVHKSQGSEFAHTALILPDTLNPVLTKELVYTGITRARHWF
SLIESRSGVFDEAVRRQVERRSGLVEALGERAMPG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaactgtccctgctgatgggcgaagcggcgccggccgccgaactgcacgac
gccgccggcctgctggcgctgctcgacgcctgggtcgagcgcggctggctgcgcgccctc
gaccgcgcgctggccggcttcttccgcgaactggacgacagctgcccgccgctggcgctg
ctcgctgccgccctggccagccaccagctcggccacggccacgtctgcctggatctggcg
gcgaccttggccagcccggacttcgccctgtcgctgccgccggaaggcgaggacgccgcg
cgcgccagcctgctgccctcggagatcctcgccggcgtcgagctggcgcagtggcgggcg
gcgctggccggcagccggctggtggcgctcgacggcgcgggcgaggaggcgccgctggtg
ctgtccggcgagcgcctctacctgcgccgctactggaactacgagcgcgcggtggccgcg
gcgatcggtgcgcgcctgcaggatgcgccggccttgccggcggatctttcccatcgcctg
ggccagctcttccccgagccgctgttggtcgacggcgcgcgccagaccgactggcagaag
ctcgcctgcgccctggccgcgcgcggcagcttcagcctgatcaccggcggccccggcacc
ggcaagaccaccaccgtggtgcgcctgctggcgctgttgcaggccccggcgctggccgcc
ggccaggcgctgcgcatccgcctcgccgcaccgaccggcaaggccgccgcgcggctgacc
gagtcgatcggcgcccaggtcgcctcgctggatgtggataactcggtgaaaaaggccatt
cccagcgaggtcaccaccctgcaccggctgctcggcagcctgccggacagccgccacttc
cgccaccacgccggcaacccgctgccgctcgacgtgctggtggtcgacgaggcgtcgatg
atcgacctggagatgatggcctgcctgctcgccgccctgccgcgccacgcccggctgatc
ctgctcggcgacaaggaccagctcgcctcggtggaggccggcgcgctgctcggcgacctc
tgccgcgacgccgagggcggcttctacggcgccgacacccgcgcctggctggaggcggtc
ggcggcgaaaccctcgccgaccccgccttgcgggaaggcgacgccgggcgccagccgctg
gcccagcgcaccgtgatgctgcgccactcgcggcgcttcggcagcggctcgggcatcggc
cgcctggcccgcgcggtcaactgtcgcgatgcggccggcgcgcggaccatcctcgccgaa
ggcagccgcgacctgcacgtgctgcgcctgcgcggcgaggaggatgcggcactggagcgc
ctgctgctcggcggcctgccgatgcaggacaaggccaagccgcagggctatgcccattac
ctcgagcggctgcgcgaggcgcgcccggccgccgactgcccgcccgaccatgacgactgg
aagaactgggcagcagcggtgctcaaggccttcgacgaattccagctgctctgcgccgtg
cgcaagggaccctggggcgtggaagggctcaacccgcggatcgccgcggccctgcaccgg
cgcggcctgctcgagggcgaccagggctggtacgaagggcgtccggtgctgatgacccgc
aacgactacagcctgggcctgatgaacggcgacatcggcatcgccctgcgcctgcccgag
cccgacacgccggcgcagacggtgctgcgcgtggtctttccgcgcaacgacggctcggac
gggctgcgctacatcctgcccagccgcctgagcgcggtggagacggtgttcgccatgacc
gtgcacaagtcccagggctcggaattcgcccacaccgcgctgatcctccccgacaccctc
aacccggtgctgaccaaggagctggtctacaccggcatcacccgcgcgcggcactggttc
agcctgatcgaaagccgcagcggcgtgttcgacgaggcggtcaggcggcaggtggagcgg
agaagcgggttggtggaggcgttgggggagagggcgatgcctggatga
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