Azotobacter chroococcum: Achr_4170
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Entry
Achr_4170 CDS
T03640
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acx
Azotobacter chroococcum
Pathway
acx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Achr_4170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acx03400
]
Achr_4170
Enzymes [BR:
acx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Achr_4170
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Achr_4170
DNA repair and recombination proteins [BR:
acx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Achr_4170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AJE19923
UniProt:
A0A0C4WG79
LinkDB
All DBs
Position
452319..453131
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLVGQRVERVVVRERRLRWPIPEDLDVRLSGQRIEAVERRAKYL
LIRAEAGTLIGHLGMSGSLRLVEAGLPVARHEHVDILLESGMALRYTDPRRFGALLWSLD
PLAHELLRRLGPEPLGEDFDGERLYRLSRGKSLAVKPFIMDNAVVVGVGNIYASEALFAA
GIDPRRAAGSVSRARYERLAGEIRRILAEAIECGGTTLRDFVGGDGKPGYFQQTLLVYGR
GGEFCKVCGATLHEVRLGQRASVYCGRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaaaccacccgccgcgggatcgcgccgcatctggtcggc
cagcgtgtcgagcgggtcgtcgtccgcgagcgccggctgcgctggccgatccccgaggac
ctcgacgtgcgcctgtccggccagcgcatcgaggcggtggagcgccgcgccaagtacctc
ctgatccgcgccgaggcgggcaccctgatcggccatctgggcatgtccggcagcctgcgg
ctggtcgaggccgggttgccggtggccaggcacgagcacgtcgacatcctcctggagtcg
gggatggcgctgcgctacaccgacccgcggcgcttcggcgcgctgctctggagcctcgat
ccgctggcgcatgagctgctgcgccggctcggcccggagcccctgggcgaggacttcgac
ggcgagcgcctgtaccggctgtcgcgcggcaagagcctggcggtcaagccgttcatcatg
gacaacgcggtggtggtcggggtgggcaacatctacgccagcgaggcgctgttcgccgcc
ggcatcgatccgcggcgcgccgccggctcggtctcgcgggcccgctacgagcggctggcc
ggggagatccggcgcatcctcgccgaggccatcgagtgcggcggcaccaccctgcgcgac
ttcgtcggcggcgacggcaagcccggctacttccagcagaccctgctggtctacgggcgc
ggcggcgaattctgcaaggtctgcggcgctaccctgcacgaggtgcgtctcggccagcgc
gccagcgtctactgcggccgctgccagcgctga
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