Azotobacter chroococcum: Achr_4520
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Entry
Achr_4520 CDS
T03640
Name
(GenBank) Sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
acx
Azotobacter chroococcum
Pathway
acx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Achr_4520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acx03021
]
Achr_4520
Transcription machinery [BR:
acx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Achr_4520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
HTH_7
HTH_28
HTH_20
HTH_11
GerE
HTH_IclR
Xre-like-HTH
DUF1804
HTH_36
HTH_26
HTH_40
HTH_AsnC-type
PhyR_sigma-like
NirdL-like_HTH
HTH_3
HTH_10
HTH_29
HTH_38
Terminase_5
Rv2175c_wHTH
TnsD
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AJE19958
UniProt:
A0A0C4WGA5
LinkDB
All DBs
Position
complement(495368..495949)
Genome browser
AA seq
193 aa
AA seq
DB search
MTSRYASHIIIIIIISTESRALAVNTGNLDRHNLLHSLYLDHRLWLNGWLRRRLGCPHSA
DDLTQDAFVQVMGSRDLLRLEQPRAFLTTIAKRLLFNHYRRQDVERAYLEALAALPAAEQ
PSEEVRAIAMETLLELARLLEDLPLPVRQAFLYAQLDGLPYAEIAERLGISLATVKRYLA
KAAQRCYFAELYE
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccggtacgcttcccacataataataattattatcattagcaccgaaagccgg
gctctcgccgtgaacacaggcaacctcgatcgtcacaacctgctgcacagcctctatctg
gatcatcgcctctggctcaacggctggctcaggcgccggctgggctgtccgcacagcgcc
gacgacctgacccaggacgccttcgtgcaggtcatgggctcccgcgacctgctgcgcctc
gagcagccgcgggccttcctgaccaccatcgccaagcggctgctgttcaaccactaccgt
cgccaggatgtcgagcgcgcctacctcgaagccctggcggcgctgcccgccgcggagcag
ccgagcgaggaggtccgcgccatcgccatggagaccctgctggagctggcgcggctgctg
gaagacctgccgctgccggtccgccaggcgttcctctatgcccagctcgacggtctgccc
tatgccgagatcgccgagcgcctcggcatctccctcgccaccgtcaagcgctacctcgcc
aaggccgcgcagcgctgctatttcgccgagctgtacgaatga
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