Azotobacter chroococcum: Achr_7880
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Entry
Achr_7880 CDS
T03640
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase, RNA binding domain
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acx
Azotobacter chroococcum
Pathway
acx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Achr_7880 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acx03019
]
Achr_7880 (pnp)
03016 Transfer RNA biogenesis [BR:
acx03016
]
Achr_7880 (pnp)
Enzymes [BR:
acx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Achr_7880 (pnp)
Messenger RNA biogenesis [BR:
acx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Achr_7880 (pnp)
Transfer RNA biogenesis [BR:
acx03016
]
Prokaryotic type
tRNA degradation factors
Achr_7880 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
Motif
Other DBs
NCBI-ProteinID:
AJE20283
UniProt:
A0A0C4WGQ7
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All DBs
Position
877042..879150
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AA seq
702 aa
AA seq
DB search
MNPVIKTFQFGQSTVTLETGRIARQASGAVLVTVDEDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVICTVLST
SKKTDPDIASMIGTSAALAVSGIPFSGPIGAARVGYHEETGYLLNPTYEQLKASRLDMVV
AGTESAVLMVESEAEELTEDQMLGAVLYAHEEFQAVIRAIKEFAAEAARPAWSWEPPTEP
SALLEAIRAGFGEAISQAYTITVKQERYNRLDELRAQAVASLAGEAEGQPSVGEVKDAFG
LIEYRTVRENIVDGKPRIDGRDNRTVRPLKIEVGVLPKTHGSALFTRGETQALVVATLGT
ARDAQVLDTLEGERRDSFMLHYNFPPFSVGECGRMGSAGRREIGHGRLARRGVQAMLPKG
DEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGERFAVL
TDILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEIALNQALEARLNILGQMS
QVIGQSRSELSVNAPTMLAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIF
GETREAAEAAKQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDQR
IEKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggttatcaagacattccagttcggtcagtcgaccgtcaccctggagaccggc
cgcatcgcccgccaggcctccggcgccgtattggtcaccgtcgacgaggacgtgaccgta
ctggtcaccgtggtcggcgccaagcaggccgatccgggcaagggtttcttcccgctgtcc
gtgcactatcaagagaagacctacgccgccggccgaatccccggtggtttcttcaagcgc
gaaggccgcccgagcgagaaggaaaccctgacctcgcgcctgatcgaccggccgatccgt
ccgctgttcccggaaggcttcatgaacgaggtgcaggtgatctgcaccgtgctttccacc
agcaagaagaccgatccggacatcgcttcgatgattggcacctccgctgccctggcggtc
tccgggattcccttcagcggcccgatcggcgccgcccgcgtgggttaccacgaggaaacc
ggctacctgctgaaccccacctacgagcagctcaaggcctcgcgcctggacatggtggtg
gccggtacggaatccgccgtgctgatggtcgagtccgaagccgaggagttgaccgaggac
cagatgctgggcgccgtgctgtacgcccacgaggagttccaggcggtgatccgggccatc
aaggagttcgccgccgaggctgcccgtccggcctggagctgggagccgccgaccgagccg
agcgcgctgctcgaggccattcgcgccgggttcggcgaggcgatctcgcaggcctatacc
atcaccgtcaagcaggagcgctacaaccgcctcgacgagctgcgcgcccaggccgtggct
agcctggccggcgaagccgagggccagccgtccgtcggcgaggtcaaggatgccttcggc
ctgatcgaataccgtaccgtgcgcgagaacatcgtcgatggcaagccgcgtatcgacggt
cgcgacaaccgcaccgtgcgcccgctgaagatcgaggtcggcgtgctgccgaagacccac
ggttcggccctgttcacccgcggcgagactcaggcgctggtggtggccactctgggtacc
gcgcgtgatgcccaggtgctcgacaccctggaaggcgagcgcagggacagcttcatgctg
cactacaatttcccgccgttctcggtgggtgagtgcggtcgcatgggcagtgccggccgt
cgcgagatcggccatggccgcctggcccgccgcggtgtgcaggccatgctgccgaagggc
gacgagttcccctataccgtgcgtgtggtctcggaaatcaccgagtccaacggctccagt
tccatggcttcggtctgcggtgcctccctggcgctgatggatgccggcgtgccgatgaag
gcgccggtggccggtatcgccatgggtctggtcaaggaaggcgagaggttcgccgtgctg
accgacatcctcggcgacgaggaccacctgggcgacatggacttcaaggtggccggtacc
gccaagggcgtcaccgcgctgcagatggacatcaagatccagggcatcaccgaggagatc
atggagatcgccctgaaccaggcgctggaagcccgcctgaacatcctcggccagatgagc
caggtgatcggccagtcgcgcagcgagctgtcggtcaacgccccgaccatgctggcgatg
aagatcgatcaggacaagatccgcgacgtgatcggcaagggtggcgccaccatccgcgcc
atctgcgaggagaccaaggcctccatcgatatcgaggatgacggctcgatcaagatcttc
ggcgaaacccgcgaggcggcggaggcagccaagcagcgcgtgctgtccatcaccgccgag
gccgagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgccttc
gtcaacatcctgccgggcaaggatggcctggtgcacatctcgcagatcagcgaccagcgc
atcgagaaggtcaccgacgtgctcaaggaaggccaggaagtgaaggtgctggtgctcgac
gtggacaaccgcggccgcatcaagctgtcgatcaaggatgtcgccgctgcggaagcatcc
ggcgtctga
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