Anabaena cylindrica: Anacy_0657
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Entry
Anacy_0657 CDS
T02435
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acy
Anabaena cylindrica
Pathway
acy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anacy_0657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acy03019
]
Anacy_0657
03400 DNA repair and recombination proteins [BR:
acy03400
]
Anacy_0657
Enzymes [BR:
acy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Anacy_0657
Messenger RNA biogenesis [BR:
acy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Anacy_0657
DNA repair and recombination proteins [BR:
acy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Anacy_0657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
GerE
HTH_11
HTH_38
TnsD
HTH_24
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AFZ56247
UniProt:
K9ZCD5
LinkDB
All DBs
Position
792547..794721
Genome browser
AA seq
724 aa
AA seq
DB search
MLQYPELEKKLKYHFGYDQFRPGQRQIIEDALQNRDLMVVMPTGGGKSLCFQLPALLKPG
LTVVVSPLIALMQDQVEALRNNNISATFLNSSLNSYKVRSREEAIMNGKVRLLYVAPERL
VSDRFLPLLDVVKEKIGISTFAIDEAHCVSEWGHDFRPEYRQLKLLRKRYPDVPTIALTA
TATDRVRADIIEQLGLKQPSIHIASFNRQNLYYEVRAKSKRAYAEILEIVRENEGSGIIY
CLTRKKVDELTFKLQKDKVAALPYHAGLSDDERSKNQTRFIRDDVRVMVATIAFGMGINK
PDVRFVIHSDLPRNIEGYYQESGRAGRDDEPSRCTLFFSFADVKTIEWSINQKTDPQEQL
IAKQQLRQVIDYAEGTDCRRTIQLGYFGERFAGNCGNCDNCRYPKPVQDWTIEAMKFLSC
VARCKERYGMLYIIDVLRGAKNQKIALNGHDQLSTYGIGKDKTVDEWRMLGRSLLHQGIL
EQTPDGYSVLKLNPLSWEVMRKQRTVSIAVPIAQKISYEEGNVKEAEVEVLMHRLRSLRK
QIADEQAVPPYVIFHDSTLKLMAQVQPKTLHEFGELSGVGSHKLAQYGAKFLTEIQAYRQ
EQGLQPLTINQVDYAPLPNFPSDTELTTLELYQQGLSIEEIAQKRNIRPTTIIRHISDLI
EKNQPIDLNKLVPLEHQQKIWQVLEVLGDISLTPIRDHLGESYSFDEIRLVRGIWRQKKR
NSKS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagtatcctgaactcgaaaaaaagcttaaatatcactttggttatgatcaattc
cgccctggacaaaggcaaattattgaagatgcgctgcaaaatcgtgatttaatggtggtg
atgccgactggtgggggtaagtctttgtgctttcaattacctgcactgctaaaaccaggt
ttaacggtggtggtgtcgccgttgatagcattgatgcaagaccaagtggaagcattgcga
aataataacatttctgccacatttctcaatagtagcctcaactcctataaagtgcgatcg
cgtgaagaggcaattatgaatggtaaagttaggttactctacgtcgccccagaacggtta
gttagtgatagatttctgccgcttttggatgtagttaaagagaaaattggcatttctacc
tttgctattgatgaagcgcactgtgtttccgaatggggacatgattttcgtccagaatat
cgccagttaaagttactgcggaaacgctatcctgatgttcctactatcgccctcactgct
accgctacagatcgcgtccgggctgatattattgaacaattaggattaaagcaaccaagt
attcatattgctagttttaaccgccaaaatctttattatgaagttagggctaaaagtaaa
cgcgcttacgctgaaatattagaaattgttagagaaaatgaaggttcaggaattatctat
tgtttaacccgtaaaaaggttgatgaattaacttttaaattacaaaaagataaagttgca
gccttaccatatcatgcgggattaagtgatgatgaacgctctaaaaatcaaactcgattt
attcgggatgatgtgcgggtaatggtggcgacaattgcttttggaatgggaattaataag
cctgatgtgcggtttgtaattcattctgacttaccgcgtaatattgagggttattatcaa
gaatcaggaagggcggggagagatgatgaaccttcacggtgtacgctcttttttagtttt
gctgatgtgaaaacgattgaatggagtattaatcaaaaaacagatccacaagaacaatta
attgcgaaacagcaactacgacaggtaattgattatgcagaagggacagactgtagacgc
actattcaattaggttattttggggaaagatttgcaggtaattgtggcaattgtgataat
tgtcgttatcccaaacctgtgcaagattggactattgaagcgatgaagtttttatcttgt
gtggctaggtgcaaagaaagatatggaatgctttatataattgatgtgttgcgaggcgcg
aaaaaccaaaaaattgccctgaatggacatgatcaattatccacttacgggattggtaaa
gataaaactgtagatgagtggaggatgttggggcgatcgctcttacatcaaggtatacta
gagcaaacccctgatggttactcggttttgaagcttaaccccctcagttgggaagtaatg
cgaaaacagcgtactgtctctattgcggttcccatagcccaaaaaatcagctacgaggag
gggaatgttaaagaggctgaagtcgaagttctcatgcacagattgcgatcgctccgcaaa
caaattgctgatgagcaagcagttccaccttacgtcatttttcatgattctaccctgaaa
ttaatggcgcaagtacaacccaaaaccttacatgaatttggtgaactctcaggtgtaggt
agtcacaaattagcccaatatggtgcaaagttcctaaccgaaattcaagcctatcgtcaa
gaacaaggtttacagccattaacaataaatcaagttgattacgcaccactgcctaatttc
ccctctgataccgaattaacgacattagagttatatcaacagggtctgagcatagaagag
attgcccaaaaacgcaacattcgtcccaccacaattatccgtcacatctcagatttaatt
gaaaaaaatcaacccatagatttaaacaaattagtacctctagaacatcaacaaaagatt
tggcaagttttagaagtactaggcgatatttccctgacaccgatccgagatcatttaggt
gaaagttacagttttgatgaaattcgcctagtgaggggaatttggcggcagaaaaaacgt
aattctaaatcttga
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