Anabaena cylindrica: Anacy_0924
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Entry
Anacy_0924 CDS
T02435
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acy
Anabaena cylindrica
Pathway
acy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anacy_0924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acy03019
]
Anacy_0924
03400 DNA repair and recombination proteins [BR:
acy03400
]
Anacy_0924
Enzymes [BR:
acy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Anacy_0924
Messenger RNA biogenesis [BR:
acy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Anacy_0924
DNA repair and recombination proteins [BR:
acy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Anacy_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
HTH_11
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
AFZ56500
UniProt:
K9ZDP3
LinkDB
All DBs
Position
1099193..1101352
Genome browser
AA seq
719 aa
AA seq
DB search
MTNAGYLLCYNSMINGYPAYMTTILKEKALLLLRQALNNPNADFRDGQWEAIEELLLNKS
RLLVVQRTGWGKSLVYFLATRLLRDQGAGCTLLISPLLALMRNQISAAQRIRVKAETINS
SNTDNWSFIETKLLANQVDILLISPERLANEEFRENILLPLSQKIGLFVVDEAHCISDWG
HDFRPDYRRIVRILQALPQNIPVLTTTATANNRVVDDIKAQLGANLRISRGDLTRKSLRL
QNIYLPSQAARLAWLAQYLPQLPGSGIIYALTVRDAQRVADWLKTQNISAKAYYGDLDTE
VRISLENELLNNQIKVLVATTALGMGFDKPDLGFVIHYQRPGSVVHYYQQVGRAGRAVET
AYGILLSGDEDEEITNYFINTAFPPEIHTQKVLNELENAVDGFSIPQLEQKLNLSRGQID
KVLKILSLEYPAPVSKQGSKWYLNPVNYQYNTEKIELLTQIRRNEQARMLDYMKSQQCLM
AFLAAELDDPNPEECGRCAVCLGKPLLPETFSDELVNKAILYLRRSSQIIEPRKQWPPQA
LLVYRFSGNIKANLKAEVGRTLSLWDDAGWGELVKRGKYQDNNFDDALVQATVEMIQHWK
PQPFPTWVTCVPSLNRPELVPNFAQRLADKLGLPFKPIVRKIHPTQLQKKMSNSYQQAHN
LDGSFAIESWKGISGNVLLIDDIVDSRWTFTVIAALLRNAGSGLVYPVALALNSLGQSD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgctggttatcttttatgctacaacagtatgataaacggatatccagcgtat
atgacaaccatactcaaagaaaaagcattattgcttctgcgtcaggctttgaataatcca
aacgctgattttcgtgatggacaatgggaagctattgaagaattactactgaacaaatca
cgattactcgtcgttcaacgcacaggttggggaaaaagtctagtttattttttagcaact
cgcttgttacgagatcaaggtgctggttgtactcttttaatttctcctcttttagcatta
atgcgaaaccaaatttcagcagcacaacgtattcgagtaaaagccgaaacaattaactct
agtaatacagataattggagttttatagaaacaaagttgttagcaaatcaagtagatatt
ctactaatttcacctgaaagattagctaatgaggaatttcgagaaaatattcttttacca
ttatctcaaaaaattggtttatttgtagttgatgaagctcattgtatttctgactgggga
catgattttcgtcctgattatcgccgcattgtcagaattttacaagcattaccacaaaat
attcctgttttgactacaaccgctacagctaacaaccgagtagttgatgatattaaagct
caattaggagcaaatctccgtatttctagaggtgatttaactagaaaaagtttgcgatta
caaaatatttatcttcctagtcaagcagcaagattagcttggttagcccaatatctacct
cagttacccggaagcggtattatttacgcattaacggtaagagatgctcaacgagttgct
gattggttaaaaacacaaaatattagtgctaaagcctattatggagatttagataccgaa
gttcggatatcattagaaaacgaattactcaacaaccaaattaaagtcttagtcgcaacg
acagctttaggtatgggttttgataaaccagatttaggctttgtaattcattatcaaaga
cctggctctgtcgtccactattatcaacaagtaggacgagcaggtagagcagtagaaaca
gcttatggtattctcttaagtggtgatgaagatgaagaaattactaactacttcattaat
acagcatttcctccagaaattcatacacaaaaagttttgaatgaactagaaaatgctgtt
gatggtttttctattcctcaattagaacagaaacttaatctttcaagaggacaaattgat
aaagttttaaaaattctatccctggaatatcctgcacctgtaagtaaacaaggttcaaaa
tggtatcttaacccagtaaattatcaatacaatactgaaaaaattgaacttttaacacaa
attcgccgaaatgaacaagcgcggatgttagattatatgaaaagtcaacaatgcttaatg
gcttttttagcagcagaattagatgatccaaatccagaagaatgtggtagatgtgcagtg
tgtttgggtaagcctttgttaccagaaactttttcagatgaacttgtaaataaagcaatt
ttatatttacgtcgtagtagtcaaattattgaaccacgtaaacaatggccaccacaagca
ttgctagtttatagattttcgggaaatataaaagctaatttaaaagcagaagtaggaaga
acattgtctctatgggatgatgccggttggggagaattagtcaaacgtggtaaatatcaa
gataataattttgatgatgcacttgtacaagctactgttgagatgattcaacattggaaa
cctcaaccttttcccacttgggtaacttgtgttccttccttaaatcgtccagaacttgta
cccaacttcgcgcaaagactagccgataaattaggcttaccatttaaacctattgttcgc
aaaattcatccaactcagttacaaaaaaagatgagtaatagttatcaacaagctcataat
ttagatggatcttttgcaattgaatcttggaaaggaatcagtggtaatgtattattaatt
gatgatatagtagattcccgttggacttttacggtaattgcagcacttttgcgtaatgct
ggaagtggattagtttatcctgtagcattagctcttaattcattaggtcaatcggattag
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