Anabaena cylindrica: Anacy_2838
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Entry
Anacy_2838 CDS
T02435
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acy
Anabaena cylindrica
Brite
KEGG Orthology (KO) [BR:
acy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acy03400
]
Anacy_2838
DNA repair and recombination proteins [BR:
acy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Anacy_2838
Archaeal homologous recombinant proteins
Anacy_2838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
CTU2
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFZ58270
UniProt:
K9ZIW3
LinkDB
All DBs
Position
complement(3228837..3231860)
Genome browser
AA seq
1007 aa
AA seq
DB search
MIPVQLILKNFLSYRDATLDFGGLHTACICGSNGAGKSSLLEAITWVIWGESRATVEDDV
IYSGAKEVRVDFTFHNNQQTYRVIRTRVRGATSILEFQIETPAGFRPLTGKGVRATQDVI
LQHIKLDYDTFINSAYLRQGRADEFMLKRPTERKEILAELLKLNQYDQLEERAKDFSKQY
KGRLEELERSLEGIKTQLQQRETTQAQKVELEVQLDKLQQQQAFDNIQLQSLQVVQHQRQ
SWEQQLSFVRQQYQNLSQDCDRLHKEQLTVQSQLADLETTLNQELEITSGYAEYQSLQSQ
EEAFATKFAQHTQATGLRQQQQQQLNKQIQTLERQLQQSQAQLEALEQQEREIQQTLTKS
PEVETALAQLATARNHLSHLDQLQMQVNPLLQQRATLQTQLDRTHAGLIARLEQLQNTEN
QLQSQNRRQPQLQQAVMDVGVQIEELEKKRVYLQRVQEKGQERRHFIERLQTTQKDYEKV
LAELEQKLQMLQNPDALCPLCERPLDEHHWSRVIQKTQLEYEDTQGQFWVVREQMAVSDK
EIQILRQEYREISQQLAVYDTLREKRGQLAAQLQATTDIQEQLRQLGLEREHLERSLQGN
YAPDKQAELQQLDEYLQQLSYSEQDHALARSEVERWRWAEIKQGQIKEANKRQTQLAARK
PELQATIEQLKVRIQFEQTDSDIAKQIEALTVQLAELNYSSEQHNHLRQAVRESQSWQLR
YQQFLSAQQQYPQLQTRLQDLTSSQNTRLADQQNLASQIDSIVEQLKLTANPVDQINALE
RQIAIRRRELDEKIANLGRLEQLIHQLETLQIQYEQEQEQLQSCKQQQRVYQELAQAFGK
NGIQALMIENVLPQLEAETNQLLSRLSANQLHVQFVTQKVGRSGKSSKKNAKLIDTLDIL
IADARGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIIDEGFGTQDAEGCDR
LIASINAIAADFACILTVTHMPHLKEAFQARIEVNKTQQGSQLSLLI
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatcccagtacaacttatcctcaaaaattttcttagttaccgtgatgcaactttagat
tttggcggtttgcatacggcttgtatttgtggttctaatggtgcggggaaatcttctcta
ctcgaagcaatcacttgggtgatttggggtgaaagccgtgccactgttgaagatgatgtg
atttattctggtgccaaagaagttagagttgattttacttttcacaataaccaacaaact
tatcgagtgattcgtacccgcgttaggggtgcaactagtatactcgaatttcaaattgaa
actcctgctggttttcgtcctctcactggtaaaggggtacgagcaacccaggatgtgatt
ctacaacatatcaagctcgattacgatacttttattaattcggcttacttacgtcaaggt
agagcagatgaattcatgctcaagcgtcccacagaacgtaaggaaattttagcggagtta
ttaaaactcaatcaatatgatcaattagaagaacgagctaaggacttttctaaacagtat
aaaggcagattggaagagttagagcgttctttggaaggaattaaaactcaacttcaacaa
cgggagacgacacaagcgcaaaaagttgagttggaagttcaactggataaactgcaacag
cagcaagcttttgataatattcaattacaaagtttgcaagttgtccaacaccaacgccaa
agctgggaacagcaattgagttttgtaaggcaacaataccaaaatctgagccaagattgc
gatcgcttgcacaaagaacaattaacggtacaatctcagttagcagatttagaaactact
ctcaatcaggaattagaaattacatctggatatgctgaatatcaaagtctgcaatctcaa
gaggaagcttttgctacaaaatttgctcaacatactcaagctactggcttacgacaacaa
cagcaacaacaactgaataaacaaattcaaacccttgaacgtcaactacaacaatctcaa
gctcaattagaagctttagagcaacaagagcgagaaattcaacaaactctcaccaaatcc
ccagaagtagaaacagctttagctcaattagctaccgcacgcaatcatttatctcattta
gatcaattgcaaatgcaagtgaatcctttgttacaacaaagagccactttacaaactcaa
ttagatcgtactcatgctggattaatagcacgactagaacaactacaaaatacagaaaac
caactccaaagccaaaatcgccgtcaaccgcaactacagcaagctgtgatggatgtaggt
gtgcaaattgaagaactggagaaaaagcgggtttatttgcaacgggtacaggaaaaagga
caggaacgcagacactttatcgaacggttacaaactacacagaaagactacgagaaagta
ctggcagaactagagcagaaattgcaaatgctccaaaatccagatgcgttatgtcctttg
tgcgaacgtcctctagatgaacatcactggagtcgagttatccaaaaaactcaacttgaa
tatgaagatactcaagggcaattttgggtagtgcgggaacaaatggcggtttcagataaa
gaaattcaaatactcaggcaagaatatcgggaaatatcgcaacaattagcggtttatgat
actttacgggaaaaaagaggacaattagcagcacagttacaagcaactacggatattcaa
gaacagttacgacaacttggtttagaacgagaacatttagagcgttctttgcaaggtaat
tatgctcctgataaacaagctgaacttcagcagttagatgaatatttgcagcaactcagt
tatagtgaacaagaccacgccttagcaagaagtgaagtagagcgttggcgttgggcagaa
attaaacaagggcaaattaaggaagcaaataagcgtcaaactcaattagcagcgagaaag
ccagaattgcaagctactattgagcagttgaaggtgagaattcagtttgaacaaacagat
tctgatattgctaaacaaatagaagctttaactgtacaacttgcggaacttaattatagt
tctgaacagcacaatcatctccgtcaagctgtgcgtgagtctcaatcttggcagttgcgt
tatcaacaatttttgtctgcacagcaacagtatcctcaattacaaaccagattgcaagat
ttgacaagttctcaaaatactagattagcagatcagcaaaatctagctagtcaaattgat
agtattgttgagcagttaaaattaacagctaatcctgttgatcaaattaatgctttagaa
cggcaaatagcaattcgcagacgagaacttgatgaaaaaatcgctaatttagggcgtttg
gaacaattaatacatcaattggaaacgctgcaaattcagtatgagcaggaacaggaacaa
ttgcaatcttgcaagcagcagcagcgagtttatcaggaattagcgcaagcttttggtaaa
aatggtatccaagctttgatgattgaaaatgtgttaccgcaattagaagctgagacgaat
caattgctttcacggttgagtgcgaatcaattacacgtacagtttgtgacgcagaaggtg
ggaaggagtgggaagtcaagtaagaaaaatgccaaattgatagatactttagatatttta
attgctgatgccagggggacgcgagcttatgaaacttattccgggggggaagcgtttaga
atcaattttgcaattcgattagctttagcgaagttattagcgcaacgtgcaggtgcggct
ctgcaattactgattatagatgaagggtttggtactcaggatgcggaaggatgcgatcgc
ttgattgcctctattaatgcgatcgctgctgatttcgcctgtatcctcaccgtaactcat
atgccccacctcaaagaagcctttcaagcccggatcgaagttaataaaactcagcaagga
tcacagttatctttattaatttag
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