Anabaena cylindrica: Anacy_4882
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Entry
Anacy_4882 CDS
T02435
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acy
Anabaena cylindrica
Pathway
acy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anacy_4882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acy03019
]
Anacy_4882
03009 Ribosome biogenesis [BR:
acy03009
]
Anacy_4882
Enzymes [BR:
acy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Anacy_4882
Messenger RNA biogenesis [BR:
acy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Anacy_4882
Ribosome biogenesis [BR:
acy03009
]
Prokaryotic type
rRNA helicases
Anacy_4882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Cas3-like_C_2
ADAMTSL1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFZ60225
UniProt:
K9ZPI3
LinkDB
All DBs
Position
5529489..5531000
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AA seq
503 aa
AA seq
DB search
MNLSFQELGISQERVAILEKMGFTTPTNIQAQAIPQLLAGRDVVGQSQTGTGKTAAFSLP
ILEQLDVNKRAVQALVLTPTRELAMQVHDAISQFMGDDGLRVMAIYGGQSIDRQMSQLKR
GVHMVVGTPGRVIDLLDRGCLKLDQVQWFVLDEADEMLSMGFIDDVIKILSQAPKERQTA
LFSATMPPSIRSLVNKFLNSPATVTVEQPKAAPNKINQVAYLIPRHWTKAKALQPILEME
DPETALIFVRTRRTAAELTNQLQAAGHSVDEYHGDLSQQARERLLIRFRNRQVRWVVATD
IAARGLDVDLLSHVINFDLPDSAETYVHRIGRTGRAGKEGTAISLVQPFERRKQQAFERH
NRQNWQVLTIPTRAQIEARHIQKLQEQVGEALTGERLASFLPIISELIEKYDAQAIAAAA
LQIAYDQTRPAWLQSGVDVPEEPSSKPKLNKRRDGGDRNRVSWAKDNGGDEGQGSSKPKL
RTGRRESSPAPSNHKLGSHTGRE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttcctttcaagaactaggtatttcccaagaacgtgtagcaattctagaaaaa
atgggctttactacacccacgaatattcaagcccaagctattccccaactgttagcaggt
cgcgatgtcgttggtcaatcacaaacaggaaccggtaaaacagcggccttttcgttgcct
attttagaacaactagatgttaacaaacgggctgtacaagctttagtgttaacacctacc
cgtgaattagcaatgcaagttcatgatgccatttcccaattcatgggtgatgatggcttg
cgagtcatggcaatttacggtggtcaatcaatcgaccgccaaatgtcacaactcaaacgt
ggtgttcacatggttgtcggtactcccggacgggtgatcgacttgttagatcgcggctgt
ctcaaacttgaccaagtacagtggtttgttttagatgaagctgacgaaatgttgagcatg
ggctttattgatgatgtcatcaaaatcctctcccaggctcccaaagaacgccaaacagct
ttattttcggcaacaatgccgccctcaattcgctccttggtcaacaagtttttgaactct
ccggcaactgtcaccgttgagcaaccaaaagctgcacccaacaaaatcaatcaagtagct
tacctgattccccgtcattggacaaaagctaaggctttacagccaattctggaaatggaa
gatccagaaacagctttaatctttgttcgcaccagacgcacagccgcagaattgactaat
caattacaagctgctggtcacagtgttgatgaatatcatggtgatttgtctcaacaagca
cgggaaagattgttgatccgtttccgcaatcgtcaagtccgttgggtagtagctaccgat
attgcggcacgaggtttagacgttgatctactttctcatgtcatcaactttgatttaccc
gacagtgccgaaacctacgttcaccgaattggtcggactggtcgcgctgggaaagaagga
actgcgatttctttagtacaaccttttgaacgccgtaagcaacaagcatttgaacgtcat
aatcgccaaaattggcaagtgttgacgattccgacaagagcgcaaattgaagctagacac
attcaaaaattgcaagaacaggtaggagaagctttaacaggtgaacgtttagcttcattt
ttaccaatcattagcgaattgattgagaaatatgatgctcaagcgatcgcagctgcggct
ctgcaaattgcttatgatcaaacccgtcctgcgtggttacaatcaggtgtagatgttcca
gaagaaccatcttccaagcccaaactcaacaagcgtcgtgatggtggcgatcgcaatcgt
gtttcttgggctaaagataacggtggtgatgaaggacaaggatcttccaaaccgaagtta
cgcacaggtcgccgtgaatcttccccagcacccagtaatcataaactaggttcacataca
ggtagagaatag
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