Anabaena cylindrica: Anacy_5076
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Entry
Anacy_5076 CDS
T02435
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acy
Anabaena cylindrica
Pathway
acy03410
Base excision repair
acy03430
Mismatch repair
acy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Anacy_5076
03430 Mismatch repair
Anacy_5076
03440 Homologous recombination
Anacy_5076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acy03400
]
Anacy_5076
DNA repair and recombination proteins [BR:
acy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Anacy_5076
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Anacy_5076
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Anacy_5076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFZ60414
UniProt:
K9ZNP7
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Position
5749506..5751566
Genome browser
AA seq
686 aa
AA seq
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MTNDQPIKRLPNQRWQIAPANPELAQNLADLTNISPIISQLLINRGMKTPEDAQVFLSPE
TLDLPSPLEDFPDLAVSVELLEDAIANQEKIAICGDYDADGMTSTALLLRSLRALGANVD
YAIPSRMHEGYGINKRIIEEFHSEGVGLVLTVDNGISAFEPIARARELGLKVIITDHHDI
PPILPPANAILNPKLIAESSPYRGVAGVGVAYILAVCLAQQLGQIKGLVQPMLALFTLGT
IADLAPLTGVNRRWVKRGLKLLPKSTLPGVQALIQVAGVQAIGAEEQGSRGAGEKVQNPK
SLKPEDIGFRLGPRINAIGRIGNPQTVIELLTTDDMGLALERAMQCEQINIQRQQMCEQI
EQEAIALVEDLYVNSLQKNRVLVVVKDNWHHGVIGIVASRLLERYGVPVFIGTFEDEGVI
RGSARGIPEFNVFAALEYCRDLLGKFGGHKAAGGFSLPADNLLSVRSRLSEFANQCLEPQ
HLKPLLKIDAQANLNQINQDLYQQLNILHPCGIDNPDPIFWTPNAQVIEQQIVGKGHIKL
TLAQTVDNIKYQIKAIAWRWRDYFPLPARVDIAYKLRENHFNDKISIEMELVGVRLPAQS
PIFSTPPSQKLRANFEYKQRQYTCGVYQNGVDSELRIKNPEGKVLVMQPGDNHGLLGSSR
DDAKKVNLSLPQYDGIIQAAIQALDS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgaccaacccatcaaacgcttacctaatcaacgctggcaaattgcgccagca
aatcctgaattagctcaaaacctagcagatttaaccaatatttcccccattatcagccag
ttgttgattaatcgggggatgaaaacaccagaagacgcacaagtgtttttaagtccagaa
actttagatttaccttctccgctagaggattttccagatttagcggtgagtgtagagttg
ttggaagatgcgatcgcaaatcaagagaagattgctatctgtggagactacgatgcagat
ggcatgactagtactgcattactactccgcagcctccgcgctttgggtgctaatgtagat
tacgctatccctagtcggatgcacgaaggttatggaattaacaaacgcattattgaagaa
tttcacagcgaaggagtcggattagttttaactgtagataatggtatatctgcttttgaa
cccattgcaagagccagagaattgggtttaaaggtaattatcaccgaccatcacgacatt
cccccaattttgcccccagctaatgcaattcttaaccctaaactcattgctgaatcttca
ccttatcggggtgtggctggtgtgggtgtggcttatattttagcagtatgtttagcccag
caattaggacaaattaagggtttagtgcaaccgatgttagcgttgtttacattgggaact
attgccgatttagctcctttaactggtgttaatcgccgttgggtaaaacgtggtttaaag
ttattacctaaatctactttaccaggggtacaggctttaattcaagtggctggagtgcaa
gcgataggagcagaggagcagggaagtaggggagcaggggagaaagttcaaaatccaaaa
tcgttaaaaccggaagatattggatttcgcttggggccgcgtattaatgcaattggtaga
attggcaatccacagacagtaatagaattgctgactactgatgatatggggttagcatta
gaaagagcgatgcagtgtgaacaaataaacatccaacgtcagcagatgtgtgagcaaatt
gaacaggaagcgatcgcacttgttgaagatttatatgtaaactctttacaaaaaaaccgg
gtattagttgttgttaaagataattggcatcatggtgtaattggaattgtcgcttctcgg
ttgctggaacgttacggtgttcctgttttcatcggtacttttgaggatgaaggcgtaatt
cgcggttcggcgcgggggattcctgagtttaacgtgtttgcagctttagaatattgtcga
gacttgctggggaaatttggtggacataaagccgcaggaggattttctctaccagcagat
aatttactctcagtgcgatcgcgtttaagtgagtttgcaaatcagtgtttagaaccccaa
cacctcaaaccactactaaaaattgatgctcaagccaacctcaatcaaatcaatcaggat
ttatatcaacagctaaatattctccatccctgcggcatcgacaacccagatcctatattc
tggacacctaatgcccaagtaattgagcagcaaattgtcggtaaaggtcacattaaactg
acattggcgcagactgtcgataatatcaaatatcaaattaaagcgatcgcttggcgttgg
cgtgattatttcccccttcctgcacgagttgatatagcttacaaactccgggaaaatcac
tttaatgacaaaatctccatcgaaatggagttagtaggtgtccgacttcccgcacaatct
ccaatattttccaccccaccatctcaaaaattacgcgccaactttgaatataaacagcgt
caatacacctgtggcgtttatcaaaatggcgtagactctgaattaagaattaaaaatcct
gaaggtaaagttttagtcatgcagcccggagataatcatggtcttttaggcagcagtcgt
gatgatgctaaaaaggttaatctctctctacctcagtatgatggcattattcaagctgct
attcaggctttggatagttag
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