Anabaena cylindrica: Anacy_5579
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Entry
Anacy_5579 CDS
T02435
Name
(GenBank) Ribocuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
acy
Anabaena cylindrica
Pathway
acy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Anacy_5579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acy03019
]
Anacy_5579
Messenger RNA biogenesis [BR:
acy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Anacy_5579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFZ60888
UniProt:
K9ZNS3
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All DBs
Position
6341231..6342994
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AA seq
587 aa
AA seq
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MVKNEAEYALKIIPLGGLHEIGKNTCVFEYQDEIILLDAGLAFPTRGMHGVNIVLPDTTY
LRENRHKIKGMIVTHGHEDHIGGIAFHLKQFDIPVIYGPRLAMAMLEGKLEEAGVRDRTE
LRTVLPRDVVRIGESFFVEYIRNTHSIADSFTVAIHTPIGIVIHTGDFKIDHTPVDGEKF
DLQRLAEHGEKGVLCLLSDSTNAEVPGFTPSERSVFPNLDRVFSQATGRLFVTTFASSVH
RINMILQLARKHNRVVTVVGRSMLNLIAHARNLGYIKCEDNLFQPLHTVRGMPDENVLVL
TTGSQGETMAAMTRIANKEHPHIKIREGDTVVFSANPIPGNTIAVVNTIDKLMIQGAKVV
YGRDKGIHVSGHGCQEEQKLMIALTRPKFFVPFHGEHRMLVKHAETAQSMGIPSENMIII
ENGDVIELTEESIRVAGKVPSGIELVDTTSSGMVSSKVLEERQRMASEGLVTIAAAIDWT
GKLLAKPEIHMQGVVTSIERSLLLKWVQQRIEEILRVRWSEFVTGSEANDIDWGGLQGTL
EKELQRSIRRELQCQPTLTLLMQIPDEPAVKVADGRRRRTRSTAVAS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaacgaagctgaatacgccctaaaaattattcctttaggtggcctgcacgaa
attgggaaaaatacctgtgtttttgagtaccaagatgaaattatcctcttagatgcaggg
ttggcttttccgacacggggaatgcacggtgttaatattgtattgcctgatacaacttac
ctgcgggaaaatcgccacaaaatcaaaggcatgattgttacccatggtcatgaagaccat
atcggtggtatcgcttttcacctcaagcaatttgatatcccggtgatttatggccctaga
ctagcgatggcaatgctagagggtaaattggaagaagcgggagtacgcgatcgcacagaa
ttaagaacagtccttccccgcgatgtagtccgcatcggtgaatccttttttgttgaatat
atccgcaacactcactctatcgctgatagttttactgttgctattcacacgccaattggt
atagttatccatacgggcgactttaaaattgaccacacccctgttgatggcgaaaagttt
gacctgcaacgtttagcagaacatggtgaaaaaggcgtactttgcttattaagtgattcc
actaacgccgaagtaccaggatttacaccatcagaacgttctgtttttcccaatcttgac
cgggtattttctcaagccactgggcgcttatttgtcaccacctttgcctccagcgtgcat
cgcatcaacatgattttgcaactggctaggaaacacaaccgtgtagtcaccgttgtaggg
cgttcgatgctgaatttgattgcccatgcccggaatttaggttatatcaagtgcgaagat
aatctcttccaacccttacatactgtccgtggtatgccagatgaaaatgtgttggttctg
acgactggttctcagggtgaaacaatggcagccatgaccagaattgctaataaagaacac
ccccacatcaaaatcagggaaggagatacggtagttttctcagctaacccgattcccggt
aatacaattgcggtggttaacaccatcgacaaattgatgattcagggggcaaaagtagtc
tatggacgggataaaggtattcacgtttctggacacggttgccaagaagaacaaaagctg
atgattgctttaacccgtcctaagttctttgtgcctttccacggtgaacatcggatgtta
gtgaaacacgcagaaactgcccaaagtatgggcatcccctctgaaaatatgattattatt
gagaatggggatgtgatagaactaacagaagaatctatccgtgtggcaggtaaagtgcca
tcaggaattgaattagtggatactactagttcgggaatggttagctctaaagtgttggaa
gaacgtcaacggatggcttctgaagggcttgtaactattgctgctgctattgattggact
ggtaagctattggcaaaaccagaaattcatatgcagggtgtggtaacaagtatagagcga
tcgctcttgctaaaatgggtacaacaacgcattgaagaaatacttcgcgtccgctggtca
gaatttgtaactggaagcgaagcaaatgatatagattggggcggtttgcaaggaacttta
gaaaaagaattgcagcgttctattcgtagagagttgcaatgtcaaccaactctgactttg
ttgatgcaaattcctgatgaaccagctgtgaaggttgctgacggtagaagacgacgcact
cgttctactgctgtggcttcttaa
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