Alicyclobacillus cycloheptanicus: JI721_00470
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Entry
JI721_00470 CDS
T08830
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acyc
Alicyclobacillus cycloheptanicus
Brite
KEGG Orthology (KO) [BR:
acyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyc03032
]
JI721_00470 (topA)
03400 DNA repair and recombination proteins [BR:
acyc03400
]
JI721_00470 (topA)
Enzymes [BR:
acyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JI721_00470 (topA)
DNA replication proteins [BR:
acyc03032
]
Prokaryotic type
DNA Topoisomerases
JI721_00470 (topA)
DNA repair and recombination proteins [BR:
acyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JI721_00470 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Auto_anti-p27
Toprim_4
Toprim_3
Toprim_2
Zn_ribbon_3
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
WDM01409
LinkDB
All DBs
Position
complement(100460..102601)
Genome browser
AA seq
713 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKRYSVKASMGHVRDLPKSKLGVDVEHGFQPHYITIRGK
GDVIKALRSASKKAKRVYLAADPDREGEAIAWHLAQLLELDPNESCRVVFHEITKDAVKD
AFTEPRKLNMDLINAQQTRRILDRLVGYRLSPLLWRKVKKGLSAGRVQSVAVRLIVDRER
EIRAFVPEEYWTVDAMFVLDEGVLTARFVGYDHEKTSLPNREAVDELLSSLQGVPFQVEK
VKRSERKRNPSAPFTTSSLQQEAARKLGFRAYKTMSVAQQLYEGLEVGAEGSVGLITYMR
TDSTRISETAQAEARAFIRDRYGAPYVPETARQYQTKSGAQDAHEGIRPTSVARDPESVK
PFLSKDQYRLYKLIWERFVASQMTPAVMDTTTVDIQAGRASFRATGSVLKFPGFMAVYTE
GTDDQSTDEDTAKFLPPVRDGQALPDPDLKPEQHFTQPPPRYSESSLVKTMEELGIGRPS
TYAPTIDTILKRGYVVLEQKRFVPTELGEIVVDLLKENFHQLIDVDFTARLEKELDEVED
GEVDWVKLLAEFNASFEADLEKAEKTLEHVHIEDEVSDVVCEKCGRNMVYKQGRFGKFLA
CPGFPECRNTKPITKEVGVSCPKCGKPLVERKGKKRKVFYGCSGYPECDYVLWNRPTGAL
CPTCSHPLVEKRSKGTVTIVCSNEAAHAGGGQPPQDDGNSEDVRAREQVEAKS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttggctgattatctcgtcatcgtagagtcgcctgcaaaggcgaaaacgattgaaaaatat
ttaggaaagcgatacagcgtcaaggcttccatgggccacgtgcgggatttgccaaagagc
aagctcggtgtggatgtcgagcatggctttcaaccgcactacattacgattcgtggaaaa
ggcgacgtcatcaaggcgctgcgcagtgccagcaaaaaggccaagcgcgtgtacctggcg
gctgacccggaccgcgaaggggaagccattgcctggcacttggcccagctgcttgagctg
gacccgaatgaatcctgccgcgtcgtgtttcatgaaatcaccaaggacgcggtcaaggat
gcctttaccgagccgcggaagttgaacatggatttgattaacgcccagcagacgcgccgg
attctcgaccgcctcgtcgggtatcggctcagtccgctgttgtggcggaaagtgaagaag
ggattgtccgcagggcgcgtgcagtctgtcgcggtgcggctgattgttgaccgcgaacgt
gaaattcgggcgttcgtgccggaagaatactggacggtcgacgccatgttcgtcctggat
gagggcgttctcaccgcgcggttcgtcggctacgaccacgaaaagacgagcctgccgaat
cgagaggccgtggatgaattgctgtcgtccctgcagggtgtgccgttccaggtggagaag
gtgaaacgatccgaacgcaagcggaacccgagcgccccttttacaaccagcagcctgcag
caggaagcggctcgaaagctggggttccgcgcctacaagacgatgtctgtcgcgcagcag
ctgtatgaaggattggaagtcggcgctgaagggtcggtcggtctcatcacgtacatgcgt
acggattcaacgcggatttccgaaactgcgcaggcggaggcgagagcattcattcgcgac
cgctatggagcgccctatgtacccgagaccgcgcgccagtatcagacgaaaagcggcgcc
caggatgcccatgaaggcattcggccgacgtccgtcgctcgcgatccggaatctgtcaag
cccttcctatcgaaggaccaataccgattgtacaaattgatttgggagcgcttcgtcgcc
agtcaaatgacgccggccgtcatggatacgacgaccgtggatattcaggcggggcgggcg
tcgttccgcgcgacggggtcggtcctcaaatttcctggctttatggctgtttacaccgaa
gggacggacgatcagtcgaccgacgaagatacagccaaatttctgccgccggtgcgcgat
gggcaggccctgcctgatccggacctgaaacccgagcagcacttcacgcagccgccgccg
cggtacagcgagtccagcctggtgaagaccatggaggagctgggaattgggcgacccagt
acctacgcgcccaccattgacacgattttgaagcgtgggtacgtcgtgctggagcaaaag
cggtttgtgccaacggagctgggtgagattgtcgtcgacctgttgaaggaaaactttcat
cagctgattgacgtcgactttaccgcccggctcgagaaggaattggatgaagtcgaagac
ggcgaagtggactgggtcaaactgctcgccgagttcaatgcttcctttgaagccgatttg
gagaaggcagaaaagacgcttgaacatgttcatattgaggacgaagtctcggatgtggtc
tgtgagaagtgcggccggaacatggtttacaagcagggccgcttcggcaagtttctggct
tgtccgggctttcccgaatgccggaatacgaaaccgatcaccaaggaagtcggcgtgtcg
tgtccgaagtgcggcaaaccgctcgtcgagcgtaaggggaaaaagcgcaaggtgttctat
ggatgcagcggctacccagagtgcgattatgtgttgtggaatcggccgaccggcgcgctg
tgtccaacttgttcgcatccactggttgaaaaaagaagtaaagggactgtgacgattgtt
tgcagcaacgaagctgcacatgctggcggaggtcagccgccgcaggacgacggcaactcg
gaggatgtgcgcgctcgcgagcaggttgaggcgaagtcgtag
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