Alicyclobacillus cycloheptanicus: JI721_02575
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Entry
JI721_02575 CDS
T08830
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acyc
Alicyclobacillus cycloheptanicus
Pathway
acyc03030
DNA replication
acyc03430
Mismatch repair
acyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI721_02575
03430 Mismatch repair
JI721_02575
03440 Homologous recombination
JI721_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyc03032
]
JI721_02575
03400 DNA repair and recombination proteins [BR:
acyc03400
]
JI721_02575
Enzymes [BR:
acyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI721_02575
DNA replication proteins [BR:
acyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI721_02575
DNA repair and recombination proteins [BR:
acyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI721_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WDM01754
LinkDB
All DBs
Position
complement(550146..553382)
Genome browser
AA seq
1078 aa
AA seq
DB search
MFVHLHCHSPFSFLDGASSIESLVAQASMQGMAALALTDHNTIAGLPSFHRWAASYGIKP
ISGAELTLEDGSHLTVLAETPQGYENLCRLLTIAHEGEVRRRDPRVPDTALLTHTPGLIV
LSGCRRGRIVQHLLHGRFEAAKRVACLFRDAFPRSFYIELQGDDYPGTHRLNKRLAELAN
ACGVPIVAAGNVHYATPAQAPVHDILTCMRVGCDIRTPHADRPLNFAQFLFDADEAERRF
APWPRAMANTLLIAQRCQVVLRLDEAAFPTFDLGQMAQLDAAAAGQAVAGRTIAGRTTAG
QAAVPPQNTAQFLRDLVYQGAAERYPAVDAALRERLDHELAIIERLGYVDYFLVVWDIVN
FARKRHIRCAGRGSAADSAVAYCLYITDVDAAGRGLLFERFMSLERAEKPDIDIDFDSRR
RDEVMDYVYRKYGRDHVARVATYQTFRGRSAIREVGKALGMPAQLLDTLAKRVPWGAHAD
GLEGLFDRVPELKELARFRKQLPWLWKLSAHIAGFPRHFGMHVGGVVISRRPLLQITSLQ
PSAKGELITPFDKDAVEDVGLVKLDLLSLRTMSAVDDAIRLRARQGEVIDYDRIPLDDAK
TFEMLGTGDTIGVFQLESPAQRALQARLHPEGLEDIVASVALIRPGPIKGNMVDPFLERR
RGQAAVSYLHPKLEPILGKTYGVVLFQEQVIEIATAIANFTPGEADQLRRVMSHARSAAE
MEKIGRKFLEKAAAAGVDPEVAATIFSYIQGYASYGFCEAHAAAFAVTAYKTAYLVKHYP
AEFFAAILNQYPMGYYPVHVICAEARRRGIAMLGLDINRSEWGCTVVTGAGTPGAKGAAG
AGEAQPQPAIRLGFCLLKGFRQATAEALCTERAAHGPFRSVPDVLRRVPSLDRLMTEHLI
RAGAFDTLYAGKRRSLLWELPVWIAERNLPAETLFTQAEADGGPEFSLAERLADEYRLVG
VGTTRHWMDLFRPWARAEGYVAAEDVGAFEDGALIAIAGLVVRPHRPPTKSGKTTVFFTV
EDETGFVDATMFEAVYHACGAILFTPYGRLVGVEGHVQRRGGGKPQLIVTRVWPLATL
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgtgcacttgcactgtcactcaccgttctcgtttctggacggcgcatcttcgatt
gagtctctggtggcgcaggcgtcgatgcaggggatggctgcgctggccttgactgaccac
aataccatcgccgggctgccctcgtttcaccgctgggctgccagttatggcatcaagccg
atttccggcgcggaactcacgttggaagacggcagccacctgaccgtgctggcggagacg
ccgcaagggtatgagaacctctgccgcctgttgacgattgcgcatgaaggggaggtgcgg
cggcgcgatccgcgggtgccagataccgccctgctcacgcacacaccggggctgattgtg
ctgtccgggtgccgccggggacggattgtccagcaccttctgcacggccggtttgaggca
gccaaacgggtggcctgcctgtttcgggacgcgtttccccgctcgttctacattgaatta
cagggggacgactaccccggcacgcaccgcctcaacaaacggctggccgagctggcgaac
gcgtgcggtgtcccgattgtcgccgccggcaatgtccactatgcgacgcctgcgcaggcc
ccggtgcacgacatcctcacctgcatgcgcgtgggctgtgacatccgcacgccgcatgcg
gatcggccgctgaattttgcccagttcctgttcgacgccgacgaggcggagcgaaggttt
gcgccttggccgcgggccatggcgaatacccttctcattgcgcagcgctgccaggtggtg
ctgcgcctggacgaggccgcgtttccaacgttcgatttggggcagatggcgcagctggac
gcggccgccgccgggcaggctgttgcggggcggaccattgcggggcggaccaccgccggg
caggccgccgttcccccgcaaaatacggcccaattcctgcgtgatctcgtctaccagggc
gccgccgagcggtatccggcggtcgatgcggcgctccgtgagcggctcgatcacgaactg
gccatcatcgaacggcttggctatgtcgattacttcctcgtggtctgggacatcgtgaac
ttcgcgcgcaagcggcacatccgctgtgccgggcgcgggtctgcggcggactcggcggtt
gcgtactgcctctacatcacagacgtggacgcggcggggcgggggctcttgttcgagcgg
ttcatgagtctcgagcgggcggagaagccggacatcgacatcgacttcgacagccgccgc
cgcgacgaagtgatggactatgtgtaccgaaagtacgggcgcgatcacgttgcgcgcgtc
gccacctaccagacgtttcgcggccgctcggccatccgcgaggtggggaaggcgctcggg
atgccagcgcagttgctggacacgctggccaagcgggtgccatggggggcacacgccgac
ggccttgaggggctgttcgaccgcgtcccggagttgaaggagctcgcccgcttccgaaag
cagctgccgtggctgtggaaactgtccgcgcacatcgccgggtttccgcggcatttcggg
atgcacgtgggcggcgtcgtgatcagccgcaggccgctcttgcaaatcacctcactgcag
ccgtccgccaaaggggagctcatcacgccgttcgacaaggatgcggtggaggacgtgggc
ctcgtgaaactcgacttgctgtcgctgcgcaccatgtcggcggtggacgacgcgattcgc
ctgcgcgcgcggcagggggaggtcatcgactacgaccgcatcccgcttgacgatgcaaag
acgtttgaaatgcttggcacgggcgacacgattggcgtctttcagctggagagcccggcg
cagcgggcgctgcaggcacggctgcacccggaggggctggaggacatcgtggccagcgtg
gcgctgattcggccggggcccatcaagggcaacatggtcgatccgttcctggagcgccgc
cgcgggcaggcggcggtgtcgtacctgcacccgaagctggagcctatcctcggcaaaacg
tacggggtggtgctgttccaggagcaggtcatcgagatcgcgaccgcgatcgccaacttt
acgcctggcgaagcggaccagctgcggcgtgtgatgagccatgcccggtcggccgcggag
atggagaaaatcggccggaagtttctggagaaggctgcggcggccggggtcgatcccgaa
gtggccgccaccatcttctcgtatattcaggggtatgcgagctacgggttctgcgaggca
cacgcagcggcgtttgcggttaccgcctacaagacggcgtacctcgtcaaacactacccg
gcggagtttttcgcggcgattctcaatcagtacccgatgggctactatccggtccacgtg
atttgcgcggaggcccgccggcgcggcatcgcgatgcttggcctcgatatcaaccgcagt
gagtgggggtgcacggtggtgacgggtgccggtacgccgggcgcaaagggagccgcgggg
gccggcgaagcccaaccgcagccggccattcggctggggttttgtctgctgaaagggttt
cggcaagcgacggcggaggccctgtgtacggagcgggctgcgcacggccccttccgctcc
gtacccgatgtgctgcgccgggtgccttcgcttgaccgcttgatgacagagcacctgatt
cgcgcaggggcgttcgacacgctgtatgccggcaaacgccgcagcctgctgtgggaactc
ccggtgtggatcgcggaacgaaacctgccggcagagacactgttcacgcaggcggaagcg
gacggcggacccgagttctcgctggccgagcgcctggcggatgagtatcgtctagtcggc
gtgggtacgacgaggcactggatggacctgttcaggccctgggcgcgggccgaggggtat
gtggccgcggaagacgtgggcgcgttcgaggacggagcgctcatcgcgatcgcgggattg
gtggttcggccccatcgcccgcccaccaagagcgggaagacgaccgtgtttttcaccgtg
gaggatgagacagggtttgtcgatgccaccatgttcgaggcggtctaccatgcctgcggc
gccattctgttcacgccctatggccggttggttggtgtcgaagggcacgtacaacggcgc
ggcggcggcaagccgcagctcatcgtcacacgggtatggccgctggccaccctctag
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