Alicyclobacillus cycloheptanicus: JI721_03315
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Entry
JI721_03315 CDS
T08830
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acyc
Alicyclobacillus cycloheptanicus
Pathway
acyc03030
DNA replication
acyc03430
Mismatch repair
acyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI721_03315 (dnaE)
03430 Mismatch repair
JI721_03315 (dnaE)
03440 Homologous recombination
JI721_03315 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyc03032
]
JI721_03315 (dnaE)
03400 DNA repair and recombination proteins [BR:
acyc03400
]
JI721_03315 (dnaE)
Enzymes [BR:
acyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI721_03315 (dnaE)
DNA replication proteins [BR:
acyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI721_03315 (dnaE)
DNA repair and recombination proteins [BR:
acyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI721_03315 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
Motif
Other DBs
NCBI-ProteinID:
WDM01888
LinkDB
All DBs
Position
complement(708626..711610)
Genome browser
AA seq
994 aa
AA seq
DB search
MGQFVHLHVHTEYSLREGALRIADCVRTAADLGMPAVAITDTNAMYGVVSFYKAAKAVHI
KPIIGVQLSVGRDADHDLLREGRPGGPLIDRAVLLAENWTGYQHLVQLVTLAHTRERQPF
VTFGELGERANGIIALVGGGESAALKCFSSGETEEAEAWLRAWQQVVPATHLYVDVQDHN
VPDERRGLPSLIRWARGASVPLAATNDVHYLRREDADIQRVLAQLESNHSGRLLPGDRYE
FASAEEMERRFAKLQEAVDNTVVIAQRCNVELPIGQTLLPKYPTPSGEDAAVVLRRAAEA
GVRRRYGTPSPQVLERLNYELDIIERLGFADYFLVVADFIRFAHKNGISTGPGRGSAASS
IVAYALKITDVDPIANRLLFERFLNPERVTWPDIDTDFEYERRIEAIHYVVERYGRDRVA
QIGTFGTLAARAAIRDAGRVLQVAPKLVDQMAKLIPGHPGVTLQQAREEVGAIRDLLAAN
EHAQSLWETAVALEGFPRHTSVHAAGVVISPIPLDNLVPVQPGADGTPVTQFPMADVEAV
GLMKMDFLGLRTLTLLDRCVASIQRRTGQPFNWKAVPMDDPATFAMLARGETDGCFQLES
PGMRRVLRDLKPSGFEDMVAVVALYRPGPMENIPTFIAARHGRTPVHYPHPDLEPILQDT
YGVIVYQEQIMQIASLMAGFSLGQADLLRRAVSKKKRDVLEAERTRFVDGCMARGYEEAV
ANEVYDLIVRFADYGFPRSHAAAYAVLAYRTAYLRANHLTDFLAALLSMAIGANDKITLY
TRDARQHGIQVLPPCVAQSGAYYEAESDTVIRTGLLSVRNVGRGAVEAILQAKRERPFAS
LVDFLERVNNRACNRKAVESLLEAGAFARFLPDGASGEVALQLLNQAYAAVEERAKGVQG
GLNLTFGDEPDAALYIRCASVTRPLVAHIQSLLRTYPGEVRVALYDEAKRRVRLLEPKWT
VTVTPELIGALEELVGIGNARIGRIPSGSAGGRR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
gtgggacagtttgtgcacctgcacgtccacaccgaatactccctgcgggaaggcgccttg
cgcatcgcggactgcgtgcgtaccgcggccgatttgggcatgcctgccgtagccatcacc
gacaccaacgcgatgtacggcgtggtctcgttttacaaggcggccaaggcggtccacatc
aagcccatcatcggcgtccagttgtccgtcggacgcgatgccgatcacgacctccttcgc
gagggccggcctggaggtcccttgattgaccgcgccgtgctcctggccgaaaactggaca
ggctatcaacacctggtgcagttggtgaccctggcgcatacgcgagagcgccagccgttc
gtgacgttcggcgagctcggcgagcgggcaaacgggatcatcgcgctggtcggcggcggg
gagtcggctgcgctgaagtgcttctcgtcgggggagacggaggaggccgaggcatggctg
cgcgcctggcagcaagtggtccctgccacgcatctctatgtcgatgtgcaggaccacaat
gtaccggacgagcgccgcggcctgcccagtctcattcgctgggcgcgcggggcatctgtg
ccgttggccgcaaccaatgacgtccattacctgcgccgggaggatgcggacatccagcgc
gtgctcgcgcagctggagtccaatcacagcggccggcttttgccaggtgaccgctacgag
ttcgcgagcgcagaagaaatggagcggcggtttgccaaactgcaggaggccgtcgacaac
accgtcgtgatcgcacagcggtgcaacgtcgaactgccgatcgggcagacgctgctgccg
aagtatcccacgccttccggggaagacgcggccgttgtgctgcggcgcgcggcggaggcg
ggggtgcgccggcggtacgggacaccctcgccgcaggtgctggagcgcctcaattacgaa
ctggacatcatcgagcggctgggctttgccgattacttcctggtcgtagccgacttcatc
cggtttgcgcataagaacggcatctcgacggggccgggccgcggttcggcagccagcagc
atcgtggcctacgcgttgaaaatcacggacgttgacccgattgccaaccgcctgttgttt
gagcggtttctgaatcctgagcgggtgacctggccggacatcgacacggacttcgagtac
gagcggcgcatcgaggccattcactacgtggtggaacggtacgggcgggaccgcgtggcg
caaattggcacctttggcaccctcgcggcgcgcgctgcgattcgcgatgcgggccgtgtg
ctgcaagtggcgccgaagctggtggaccagatggccaagctgattcccgggcacccgggc
gtgacgctgcagcaggcgcgggaggaagtcggcgcgatccgcgacttgctcgccgccaac
gagcacgcgcagagcctgtgggagactgcggtggcgctcgaagggtttccgcggcatacg
tccgtgcatgcggcaggggtggtgatttcgccgattccgctggacaacctggttcccgtc
cagcctggagcggacgggacgccagtgacccagttcccgatggccgatgtggaagctgtc
gggctgatgaaaatggatttcctggggctgcggacgttgacactgcttgaccgctgcgtc
gcgagcattcagcggcgcaccgggcagcccttcaactggaaggcggtgccgatggatgac
ccggccaccttcgccatgttggcccggggcgaaacggatgggtgctttcagctggagtcg
cctgggatgcgcagggtgctgcgcgatttgaagccgtcgggctttgaggacatggtcgcc
gtcgttgccttgtaccgcccaggacccatggaaaacattccgacgtttattgcggcgcgg
cacgggcgcacgcccgtccactacccccaccccgatttggagccgattctgcaggacacg
tacggggtcattgtgtaccaggagcaaatcatgcaaatcgcgagcctcatggccggcttt
tccctgggacaagcggatttgctgcggcgcgccgtcagcaagaagaagcgggacgtgctg
gaggcggagcggacgcgctttgtcgacggctgcatggcgcgcgggtacgaagaggcagtc
gccaacgaggtgtacgacctcattgttcgcttcgcggattatgggttcccccgttcgcat
gcggcagcatatgctgtgttggcataccggacagcttacctgcgcgccaatcacctcacc
gattttttggcggccctgctgtcgatggccatcggtgcgaacgacaagattaccttgtac
acccgggacgcgagacagcacggcattcaggtactgccgccgtgcgtggcgcaaagcggg
gcgtattatgaggcggagagcgacacggtgattcgcacggggcttttgtccgtgcgaaat
gtgggacgaggcgccgtggaggccatcctgcaggcgaagcgcgagcggccgtttgcgtct
ttggtcgacttcctcgagcgggtgaacaaccgcgcgtgtaaccgcaaggcggttgagagt
ttgcttgaagccggggcgtttgcgcggtttctgccagacggtgcgagcggcgaggtggcc
ctgcaattgctcaatcaggcgtacgccgcagtggaagagcgcgcgaagggcgtgcaaggc
ggcctgaaccttaccttcggcgacgagccggacgctgcgttgtatatccgctgcgcgtct
gtcacgagaccgctcgtcgcacacattcaatcgctgcttcgcacataccctggtgaggtc
cgcgttgcgctgtacgacgaagcgaagcggcgtgtccggttgctggagccgaagtggacc
gtgacggtcaccccagagctcatcggcgcgctggaggagctggtcggcattggcaatgcg
cgaatcggacgcatcccgtcgggatcggccggtgggcgacgatga
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