Alicyclobacillus cycloheptanicus: JI721_16235
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Entry
JI721_16235 CDS
T08830
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
acyc
Alicyclobacillus cycloheptanicus
Brite
KEGG Orthology (KO) [BR:
acyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyc03032
]
JI721_16235
03036 Chromosome and associated proteins [BR:
acyc03036
]
JI721_16235
03400 DNA repair and recombination proteins [BR:
acyc03400
]
JI721_16235
DNA replication proteins [BR:
acyc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JI721_16235
Chromosome and associated proteins [BR:
acyc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JI721_16235
DNA repair and recombination proteins [BR:
acyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JI721_16235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-DNA_bdg
DUF1512_C
Ribosomal_L12
HU-CCDC81_euk_1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
WDM01182
LinkDB
All DBs
Position
3444528..3444800
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVQAVSERTELSRKDASEVVEAVFEVITEALANGEKVQLVGFGNFEIRERAARKG
RNPQTGEVIDIAASRVPAFRAGKTLREGIR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactgagctcgtgcaagccgtatctgaacgcacagaactgtcccggaaagat
gccagtgaagtcgtcgaagccgtctttgaggtcatcaccgaagccctggccaatggggag
aaagtgcagctcgtcggctttggcaacttcgagattcgggagcgcgctgcgcgcaagggc
cgtaacccgcagaccggagaggtcatcgacatcgccgccagccgggtgcccgcgtttcga
gccggtaagaccctgcgcgaagggattcgctga
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