Alicyclobacillus cycloheptanicus: JI721_16635
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Entry
JI721_16635 CDS
T08830
Name
(GenBank) DEAD/DEAH box helicase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acyc
Alicyclobacillus cycloheptanicus
Pathway
acyc03030
DNA replication
acyc03430
Mismatch repair
acyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI721_16635
03430 Mismatch repair
JI721_16635
03440 Homologous recombination
JI721_16635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyc03032
]
JI721_16635
03400 DNA repair and recombination proteins [BR:
acyc03400
]
JI721_16635
Enzymes [BR:
acyc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI721_16635
DNA replication proteins [BR:
acyc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI721_16635
DNA repair and recombination proteins [BR:
acyc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI721_16635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
RNase_T
DEAD
ResIII
Rv2179c-like
DEAD_2
DUF6381
SecA_DEAD
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WDM01253
LinkDB
All DBs
Position
3519180..3522149
Genome browser
AA seq
989 aa
AA seq
DB search
MELVVYDLETTGLRPEQDEIIEIGAVRWVDGAIGDTFHSFVRPTRRVPDEIYELTGLTPA
DLQNAPPLETVLPQFLKFISGSTLAGHNAQFDLNFLMAACDKAGYELPASRDVLDSLLLA
RVLLPFEQAHRLGDVAARCGVEQPGEHRGLADALTTAKVLSALMTEASALPYLTLQQLER
LASLFSPITANWFGMVAERRYQTYGTALPAHCDQIQQLVFAAVPPHPGETDAETAADMDG
ETPGLCADTSAAREDGHSSDSELPGADGEELVVDPSTFFTADSPLGQALPSFEIRPGQRA
MVDAVTTALEEGRHLIAEAGTGTGKSLAYLIPAALHAAREDARVIVSTHTIALQDQIEQR
DFATLRRVMNMPLSLAVFKGRTHYLCMRKLAQENAGADFGTPRPELEAYMTLLSWVANTP
AGNREELSMSGRLADVWQRVQSETETCIHKRCPFFKSCYYFRARSAAYEADIVVTNHSLV
LSDLKSEHRVLPHYDKIIFDEAHHLEEEATRHLGAEVYAGQCAASVGRLVRDGGKHGVIA
ELLNRLSDASTAEAVQIAKLETLQDGVLTVKAAMDDAFAALAQLVPAGQSEFRITPDVTR
TPAWQAYQDAVHRMTDLQTKLRQLAEDLDEAAERTADQDIAGRLYDCAGFVRDVAAKADT
LCRGGDAGPDFVVWIERTGTAERPHWSLHIAPIDVAGILRSTLFETKASVVLTSATLSVN
GNFDFISERLGLSAAAEEGRLQTLSVPSPFDYKTQAMLCVPTDVPELAKMGAEEAAVWLS
DSIYQLAKASGGRLLALFTSHAMLRATARTLRDPLRSLNIRLFAQGVDGTRSHLLEPFRK
NPNAVLLGAQSFWEGIDLPGDQLTTLVIIRLPFAPPTHPVTAARHERLEQQGKSAFWHAS
LPEAVVRFRQGFGRLIRTMSDRGVVVIYDKRIITAKYGQTFIRSLPGLRPLIAPEAQVIE
QVRRFLTRPNKASESAHTSGKEVSNERHG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
ttggaactcgtggtgtatgatttggaaacgaccgggctgcggcccgagcaagatgaaatc
atagaaattggcgccgtccgctgggtggacggcgccatcggtgacacctttcacagcttc
gtccggccgacccgcagggtgccggacgagatctacgaactcaccggactgacacccgct
gatttgcaaaatgcgccgcccctggagaccgtgctgccccagtttctaaaatttatctcc
ggcagcaccctggcgggccacaacgcgcagtttgacctcaactttctgatggcagcctgc
gacaaggcaggttacgagctgccggcgtcgcgcgatgtcctggattcgctgctcctggcc
cgcgtattgctgccctttgagcaagcacaccggctcggagacgtcgcggctcgctgcggc
gtcgaacaaccgggggaacaccgcggcctggctgacgcgctgaccaccgcgaaggtgctc
agcgcgctcatgaccgaagccagcgccctgccttatttgaccctccagcagctggaacga
ctcgccagcctgttttcgccgatcacggcgaattggttcggcatggttgcagagcgccgc
tatcagacgtacggcacggcactgccggcgcactgcgaccagattcagcagctggtgttc
gccgcagtgcccccgcatcccggcgagacggacgcagaaacggccgcagacatggacgga
gagacacccggcctttgcgcggacacgtccgccgcgcgagaggacgggcattcgtccgac
tccgaactgccaggagcggacggggaagagctggtggtggacccaagtacgttcttcacg
gcggacagccccttgggacaggcactgccttcgtttgagatccggccgggacagcgcgcc
atggtggacgcagtgacaacggcgctggaggaaggaaggcacctgattgccgaagccggg
accgggaccgggaaatccctggcgtatctcatccccgctgccctgcacgccgcgcgggag
gacgcccgggtgattgtttccacccacaccattgcgctgcaggaccaaatcgaacagcgc
gactttgcgacactccggcgcgtgatgaacatgccgttgtcgctggccgtgttcaaaggc
cgcacgcattacctgtgcatgcgcaagctcgcacaggagaacgcgggcgcggactttggc
acgccccggcccgagctggaagcctatatgaccctgctctcgtgggtggccaacaccccg
gcgggaaaccgcgaagaactgtcgatgtccggccggctggcggacgtctggcagcgcgtg
cagagcgaaacggaaacctgcattcacaaacgctgcccgttcttcaagtcgtgctattac
ttccgtgcgcgaagcgccgcctatgaggcggacatcgttgtcacgaaccactccctggtg
ctgtccgatttgaagtcggaacaccgcgtgctgccgcactacgacaaaatcatctttgac
gaagcccaccacctggaagaagaggcgaccaggcacctgggcgctgaagtctacgctgga
cagtgcgcggcctcggtagggcggctggtccgggacggcggaaaacacggggtcattgcg
gaactgctcaaccgcctgagcgatgcaagcacagcggaggcagttcaaatcgccaaactc
gagacgctgcaggacggtgtgctgaccgtcaaggcggccatggacgacgcgtttgccgcg
cttgcacagctcgtgccggccggacaatccgaatttcggatcacgcccgacgtcacgcgc
acacctgcctggcaagcttatcaagatgcggtgcaccggatgaccgacctgcaaaccaag
ctgcgtcagctcgcggaagacctggatgaagccgccgaacgcacggctgaccaggacatc
gccggccggttgtacgattgtgctggatttgtccgggatgtcgcggccaaagccgatacc
ctgtgccgcggcggcgacgcggggcctgacttcgtcgtgtggatcgaacggactggcact
gcagaacggccgcactggagcttgcacatcgcgccgattgacgtcgcgggtattttgcgt
tccaccctgttcgaaacgaaggcctccgtggtgttgacgtccgccacgctgtccgtgaac
ggaaatttcgacttcatcagcgaacgcctggggttgtccgcggcggccgaagaaggccga
ttgcagacgctgtccgtgccgtcgccctttgactacaagacccaggcaatgctgtgcgtt
cccacggacgtaccggaactcgccaagatgggcgccgaggaagcggcggtctggttgtcg
gactcgatttaccagctggccaaggccagcggcggacggctgttggcgttgttcaccagc
cacgcgatgctgcgcgccaccgcgcggacgctgcgcgatccactgcgaagcctcaacatt
cgtctgttcgcgcaaggggtggacggaacccgcagccacctgctggaacccttccgcaaa
aacccgaatgcggtgctgctcggtgcacagtccttctgggaaggcatcgacctgccgggg
gaccagctgaccacgctggtcatcattcggctgccgtttgccccgccgacccaccccgtt
acggccgcgcgccacgaacggctcgaacagcagggcaagagcgcgttctggcacgcaagt
ctcccggaggcggtcgttcgcttccgccaagggtttggcagattgattcgcaccatgagc
gaccgcggcgtcgtggtgatttacgacaagcgcatcatcacggccaaatacgggcagacc
ttcatccgttcgctgccggggttaagaccgctcatcgcaccggaagcccaggtgattgag
caggtgcggcggtttctgacgcgcccgaataaagcctccgaatccgcccacactagcggc
aaggaagtgtccaacgaacggcacgggtaa
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