Anser cygnoides (swan goose): 106029904
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Entry
106029904 CDS
T04896
Symbol
ITGB5
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-5
KO
K06588
integrin beta 5
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04145
Phagosome
acyg04148
Efferocytosis
acyg04510
Focal adhesion
acyg04512
ECM-receptor interaction
acyg04810
Regulation of actin cytoskeleton
acyg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106029904 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106029904 (ITGB5)
04148 Efferocytosis
106029904 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106029904 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106029904 (ITGB5)
04810 Regulation of actin cytoskeleton
106029904 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106029904 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106029904 (ITGB5)
Membrane trafficking [BR:
acyg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106029904 (ITGB5)
Cell adhesion molecules [BR:
acyg04515
]
Integrins
Integrin beta subunits
106029904 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
EGF_TEN
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
106029904
NCBI-ProteinID:
XP_066855873
LinkDB
All DBs
Position
6:25894004..25942697
Genome browser
AA seq
813 aa
AA seq
DB search
MPRRGGLPAPAAARRPPPRSFLLLLLLLVVAAPLQPGRGLNMCTSGSASSCEECLLIHPK
CAWCSKEEFGSTRSVPSRCDLLQNLIANGCAGAIENPRSSSSVVKDIPLSSKGSGQTHLD
VTQITPQKVALSLRPGDQTSFRVQVRQVEDYPVDLYYLMDLSLSMNDDLDNIRNLGTKLA
EEMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPSCVPSFGFRHLLSLTD
KVDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKIGWRKEASHLLVFTTDDVPHIAL
DGKLGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLGEKLAENNIHLIFAVTKSHYVLY
KNFTALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVELTVWDAPEDIALTFTATCQDGL
SYPGLRKCGDLKIGDTVSFEVSVEARSCPAEDTSHVFTIKPAGFRDTLEVAVTYNCLCGC
TGRAEPASGKCSGNGTYACGLCECDAGYLGARCECEEGAGGETHQGLCREVEGKPLCSGR
GECSCNQCVCYESEFGNIYGPFCECDDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNC
NCSTETGGCVSSDGQMCSGRGTCVCGRCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECK
LFNSGRLDNQTCQKHCKDEIITTVDVLKTDDPNAILCAYPVNNCVMKFTYSELASGKSNL
TVLKEPACSSAPSAVTIVLAVIGSVVLIGTILLGLWKLLVTIHDRREFDRFQSERSRARY
EMASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccgaggggggctgccggcccccgccgccgcccgccggccccccccgcgctcc
ttcctcctcctcctcctcctcctcgtcgtggccgccccgctgcagcccggccgaggtctc
aacatgtgcacgagtgggagcgcctcgtcctgcgaagagtgtctcctcatccacccaaag
tgcgcctggtgctccaaagaggagttcggcagcaccaggtccgtcccgtcgcggtgcgac
ctcctgcagaatctcatcgcgaacggctgcgcgggtgccattgaaaaccctcgcagcagc
agcagcgtggtgaaggacatccctctgagcagcaagggctccggccagacccacctggac
gtcacacagatcacgccgcagaaggtcgccctgagcctgcgtcccggtgaccagacctcc
ttccgagttcaggtccggcaagtggaggactatcctgtggacctctactacctgatggac
ctctccctgtccatgaacgacgacctagacaatattcgcaatctggggaccaagctggct
gaagagatgcgaaagctcactagcaatttccgcctggggtttggctcttttgtggacaaa
aacatttctcctttctcctacacggcaccaagataccaaaacaatccctgcattggctac
aagctattcccgagctgcgtcccatcctttggcttccgccacctcttgtctctgacggat
aaagtcgaccgttttaacgaagaagttcagaagcagaaggtgtcccggaacagggatgct
ccagagggcggcttcgatgcgattttgcaagctgcagtgtgcaaggagaagatcggctgg
cggaaggaagcgtctcacctgctggtcttcacgacagacgatgtgccccacatcgccctg
gatgggaagctgggggggctggtgcagccccacgacggccagtgccacctgaacgaggcc
aacgagtacagcgcctccagccagctggattatccttccctggcgcttcttggggagaaa
ctggctgaaaacaacatccacctgattttcgctgttacaaaaagtcattatgtcctgtac
aagaacttcaccgccttgattcctgggaccacggtggagattttgcacaaggactccaag
aatatcatcgagctgatagtcaaggcctacaacagtattcggtccaaagtagaactgact
gtctgggacgcccctgaggacattgccttgaccttcactgccacatgccaggatggtttg
tcctaccctgggctcaggaagtgcggggatctcaagataggagatacggtctccttcgag
gtgtctgtggaggcccgcagctgcccggccgaggacacctcccatgtcttcaccatcaaa
ccggccggcttccgcgacacgctggaggtggccgtgacctacaactgcctctgcgggtgc
acaggccgcgccgagccagccagcggcaagtgcagtggcaatgggacctatgcctgcggg
ctctgcgagtgcgacgccggctacctgggggcccgctgcgagtgcgaggagggggccggc
ggggagacgcaccaagggctgtgccgcgaggtggagggcaagcccctgtgcagcgggcgg
ggggagtgcagctgcaaccagtgcgtctgctacgagagcgagtttgggaacatctacggg
cccttctgcgagtgcgacgacttctcctgcgccaggtacaagggagtcctctgctcaggc
cacggcgagtgtcactgcggggagtgcaagtgccatgcgggctacatcggggacaactgc
aactgctccaccgagaccggcggctgcgtgtccagcgacgggcagatgtgcagcggccgt
ggcacctgcgtctgcgggaggtgtcagtgcaccgagcccggggctttcggagagacctgt
gagaagtgtcccacctgcccgggcgtctgcagcactaaaagggactgcattgaatgcaag
ctgtttaactcaggaagactggataaccaaacctgccaaaagcactgcaaggacgagatc
atcaccactgtggatgttctcaaaacggacgacccgaatgccatcctgtgcgcctacccg
gtgaacaactgcgtcatgaagttcacctactcggagctcgccagtgggaagtccaacctc
actgtcctcaaggagccagcatgcagctcagcccccagtgctgtgaccattgtgctggcc
gtcattggcagcgtggtgctgatcggcaccatcctgctggggctctggaagctgctcgtc
accattcacgacaggcgggagttcgaccgcttccagagcgaacgctccagggcgagatac
gaaatggcatccaaccccctctaccgaaagcccatttctacgcataacgtggagtttacg
ttcaacaagctcaacaagtcctacaacggtacggttgactga
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