Anser cygnoides (swan goose): 106030788
Help
Entry
106030788 CDS
T04896
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X2
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04010
MAPK signaling pathway
acyg04020
Calcium signaling pathway
acyg04144
Endocytosis
acyg04510
Focal adhesion
acyg04540
Gap junction
acyg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106030788 (PDGFRA)
04020 Calcium signaling pathway
106030788 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106030788 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106030788 (PDGFRA)
04540 Gap junction
106030788 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
106030788 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
acyg01001
]
106030788 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
acyg04090
]
106030788 (PDGFRA)
Enzymes [BR:
acyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
106030788 (PDGFRA)
Protein kinases [BR:
acyg01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
106030788 (PDGFRA)
CD molecules [BR:
acyg04090
]
Proteins
106030788 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
106030788
NCBI-ProteinID:
XP_013028223
LinkDB
All DBs
Position
4:28664290..28700905
Genome browser
AA seq
1094 aa
AA seq
DB search
MRQLSVAMGTSPRTFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDS
EVSWQYPVTEGSHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEG
KDIYIYVPDPDMPFVPSIPEDQFILVEEGDPTIIPCRTSDPNAQVTLINSLDKAVYAFYD
NKQGFIGNFLAGSYTCKTTVKGVEFKSDVFLIYILRATSQLPVEIEALKTVYKTGETIVV
TCVVFDNEVVNLQWNYPGKVKEKGVIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTAR
HATKEVKENKKVVITVHDKGFIHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDN
VTLIENLTEIVTSSSRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQV
PALILDLVDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDIH
MEAHLDEKNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLV
LLVIVIISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGL
VLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGP
HLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPA
DESTRSYVILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSL
SESEVKNLLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVK
ICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGG
TPYPGMMVDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESL
LPGEYKKSYEKIHLDFLKSDHPAVTRMRGDCDNTYIGVTYKNEDKLKDRESGFDEQRLSA
DSGYIIPLPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDD
IGIDSSDLVEDSFL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagttgtcggtagcgatgggtacttccccaaggacattcctgatcctgggatgt
ttcctcacaggcccgttcctaacattttgccagcttcctctgccgactattgttcccaac
agaaatgaaatggttgtacagctcaattccaatttcacactcaaatgctctggagacagc
gaagtgagctggcagtacccagtgaccgagggaagccacaggatagacatcagacatgaa
gagaacaacagtggcctcttcgtgacagtgctggaagtaggaaatgcctcagctgctcac
acgggcctgtatgtttgctattacaaccacactcaagtggaggatggggaagtggagggg
aaggacatctacatctatgtgcctgacccagacatgccttttgttccttccataccagaa
gaccagttcatcctagtagaagaaggtgatcccaccattatcccatgtcggacaagtgac
ccaaatgctcaagtgactttaattaacagtttagataaggctgtgtatgctttctatgac
aacaagcaaggcttcataggaaacttccttgcgggatcatacacttgcaaaacaacagtt
aaaggtgtggagttcaagtctgatgtgttcctcatctatattttaagagctacttcacag
ctgccagttgaaattgaagctcttaaaactgtctacaaaacaggcgagaccatcgtagta
acttgtgtggtctttgacaacgaggtggttaatttacagtggaattatcctgggaaagtg
aaagaaaaaggtgtgataaaacttgatgatatcaaagtcccatcgcagaagctggtttac
accttgaccattcctgaggcatcagtgaaagacacaggggattatgaatgtactgctcgg
catgcaaccaaggaggttaaggaaaataagaaagtagtcattacagttcatgacaaaggg
ttcattcatctagagcctcagtttagccctttggaagctgtcaatctacatgaagtcaaa
aattttgtcgtcgatgtgcaggcatacccagctccaaaaatgtactggttgaaggataat
gtgactctgattgaaaatcttactgagattgttactagttcaagcagagtccaggaaaca
aggtttcaaagtatactaaaattgatccgggccaaggaagaagacagtggatattatacc
ttggttgctgaaaatgaagatgagattaaaagatacaccttctcactgctaatacaagtt
ccagccttgatcttagaccttgtggatgaccaccatggctctgcagggggacagacagtg
aggtgcttggcagaggggaccccgcttcctgatgtggaatggctggtttgcaaggacatt
aaaaaatgcagcaatgacacttcatggactcttctgactaataatatctctgatatacac
atggaagcccatctggacgagaagaacatggtggaaagccaggtgaccttccagaaagta
gaggaaaccctggctgtgcgatgtgtggcaagaaacgacctcggtgctgttactcgcgaa
ctgaaacttgtggctcccaccttgcgatcagaactgacggtggctgctgcagtcttagta
ctgttagtgattgtgataatttcactgattgtcctggtcatcatctggaagcagaagcca
aggtatgagataagatggagagtcattgagtctatcagccccgacggccatgaatacatt
tatgtggacccaatgcaactgccttatgactccagatgggagtttcctcgagacgggtta
gtgcttggtcgaatccttggttctggtgcatttggaaaagtggttgaagggactgcatat
ggattgagccgttctcaaccagtgatgaaagtagctgtgaaaatgctgaaacctacagct
agatccagtgaaaaacaggcactcatgtctgaactgaagataatgacacatctcgggccc
cacctgaatattgtgaacctgctaggagcttgtacaaagtcaggtcctatttacatcatc
actgaatactgcttttatggtgatttggtgaactatctgcacaagaacagggacaatttc
ctgagccgccacccagagaagcccaagaaagatttggatatctttgggatgaacccagct
gatgaaagcacaagaagttatgtgattttatcatttgaaaacactggagaatacatggac
atgaaacaagctgatacaacccagtacgtgccaatgctggaaaggaaggagggatctaaa
tattctgatattcagagatctgtgtatgatcggccggcttcatataagaagaaatctctg
tcagaatcagaagtcaaaaaccttctttcagatgacagttcagagggcctcagcctattg
gatttgctgagcttcacctaccaggttgcacggggaatggaattcttggcttctaaaaat
tgcgtacaccgtgacttggcagctcgtaatgtccttctggctcaaggaaaaatcgtgaag
atctgtgactttgggttggctagagacatcatgcatgattccaactatgtctccaagggc
agcactttcctcccagtaaaatggatggcacctgaaagcatttttgacaatctgtacaca
acattaagtgatgtctggtcttatggcattctgctgtgggaaatattttctcttggtggc
acaccgtatcctggcatgatggttgactctactttctacaataagataaagagtggctac
cgaatggcaaaacccgatcatgctaccaatgaagtgtatgagatcatggtgaaatgctgg
aacagtgaacctgagaaaagaccctctttttaccacttgagtgaaattgtggagagcttg
ttgcctggagagtacaaaaagagctatgagaagattcacctggacttcctgaaaagtgat
cacccagctgtcacacgcatgagaggggactgtgacaatacttacattggtgtcacctac
aagaacgaagacaagttaaaggacagggagagtggatttgatgagcagaggctgagtgct
gacagcgggtacatcatccccctgcctgatattgaccctgtttctgaagatgagcttggc
aagaggaaccggcacagttcccagacatctgaagaaagtgccattgaaactggttccagt
agctctacttttatcaagagagaggatgagaccattgaggacattgacatgatggatgac
atcgggattgactcctcagacctggtagaggacagcttcctgtaa
DBGET
integrated database retrieval system
