Anser cygnoides (swan goose): 106031661
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Entry
106031661 CDS
T04896
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X3
KO
K05699
actinin alpha 1/4
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg04510
Focal adhesion
acyg04517
IgSF CAM signaling
acyg04518
Integrin signaling
acyg04519
Cadherin signaling
acyg04520
Adherens junction
acyg04530
Tight junction
acyg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106031661 (ACTN1)
04518 Integrin signaling
106031661 (ACTN1)
04519 Cadherin signaling
106031661 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106031661 (ACTN1)
04520 Adherens junction
106031661 (ACTN1)
04530 Tight junction
106031661 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
106031661 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acyg04131
]
106031661 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acyg04812
]
106031661 (ACTN1)
04147 Exosome [BR:
acyg04147
]
106031661 (ACTN1)
Membrane trafficking [BR:
acyg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106031661 (ACTN1)
Cytoskeleton proteins [BR:
acyg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106031661 (ACTN1)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106031661 (ACTN1)
Exosomal proteins of colorectal cancer cells
106031661 (ACTN1)
Exosomal proteins of bladder cancer cells
106031661 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
106031661
NCBI-ProteinID:
XP_047921269
LinkDB
All DBs
Position
5:complement(29350425..29437315)
Genome browser
AA seq
617 aa
AA seq
DB search
MEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLE
INFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHL
AEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIA
AIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYA
KRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEV
SKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQF
GAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQI
QEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASF
NHFDRDHSGTLGPEEFKACLISLGYDIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDF
MSRETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPG
ALDYMSFSTALYGESDL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaagactacgaaaaactggccagtgatctgctggagtggatccgtcgcaccatcccc
tggctggagaaccgggcaccagagaacaccatgcaagccatgcagcagaaactggaggac
ttccgggactaccgccgcttgcacaagccccccaaagtccaagagaagtgccaacttgag
atcaatttcaacaccttgcagaccaagctacggctcagcaacaggccagccttcatgcct
tcagaagggaagatggtctcggatataaacaatgcctggggtggcctagagcaggctgag
aagggctacgaggagtggttgttgaatgagatccggaggctagagaggctggatcacctg
gcagagaagttccggcagaaggcatctattcacgagtcctggacagatggtaaggaagca
atgctgcagcagaaggattacgaaaccgctaccctctcggagatcaaggccctgctgaag
aaacacgaggcctttgagagcgacctggctgcgcaccaggaccgcgtggaacagattgct
gctattgcacaagagctcaatgagctggactattacgattctccaagtgtcaatgccagg
tgccagaagatctgcgatcagtgggataatctgggtgccctaacccagaaacgtagagaa
gctttggagaggacagagaagctactggaaacaattgaccagttgtacctggaatatgcc
aaacgagctgcccctttcaataactggatggaaggggccatggaggacctgcaggacacg
ttcatcgttcacaccattgaggagatccagggattgaccacagcccacgaacagttcaaa
gccactttgccagatgccgacaaagagcgacaggccatcctgggaatccacaatgaagtc
tcaaagattgtccagacataccacgtcaacatggcaggaacgaatccgtacactacaatc
accccacaggagatcaatggcaaatgggaacatgtgaggcagctggttcctagaagggat
caagcactgatggaagaacacgctcgccagcagcaaaatgaacgacttcgtaagcagttt
ggtgcacaggccaatgtcattggaccctggatccagaccaagatggaggagattggccgc
atttcaatagagatgcatgggaccctggaggaccagctcaaccacttgcggcagtatgag
aagagcattgtgaattacaaaccaaagattgaccagttggaaggagaccaccaacagatc
caggaggcgcttatctttgacaacaagcacaccaactacaccatggagcatatccgagtg
ggctgggagcagctattaacaacaattgctagaaccatcaatgaagtggaaaaccagatt
ctgacccgtgatgccaaaggaatcagccaggaacagatgaacgagttccgggcttctttc
aaccatttcgacagggaccactccggcacacttggccctgaggaattcaaagcctgtctc
atcagcttgggttacgatattggaaacgatgcacagggagaggcagagtttgcccgcatc
atgagcatcgtcgaccctaatcgcctgggtgtagtgacgttccaggccttcatcgacttc
atgtcccgggaaacagcagatacagatactgctgaccaggttatggcttccttcaagatc
ctggctggagataagaactacatcactgtggacgaattacggcgggaactgcctcctgat
caggctgaatactgcattgctagaatggcaccctacaatggccgtgatgctgtacccggt
gccctggactacatgtccttctccacagcgctctatggcgaaagtgacctttaa
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