Anser cygnoides (swan goose): 106032030
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Entry
106032030 CDS
T04896
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X2
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acyg01002
]
106032030 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acyg04121
]
106032030 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acyg04147
]
106032030 (USP13)
Enzymes [BR:
acyg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106032030 (USP13)
Peptidases and inhibitors [BR:
acyg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106032030 (USP13)
Ubiquitin system [BR:
acyg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106032030 (USP13)
Exosome [BR:
acyg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106032030 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP
zf-UBP_var
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
106032030
NCBI-ProteinID:
XP_013030246
LinkDB
All DBs
Position
9:complement(19365881..19415346)
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AA seq
801 aa
AA seq
DB search
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVREKVPGASGGALPKRKNAKLFLDLETNGD
LNGDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQDPDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
VEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQESGVKLKPMYGPGYTGMKNLGNSCYLNAVMQTIFSIPEFQRAYV
GNLPRIYDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSDLIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRAPPELVRAKIPFSACL
QAFSEPNNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSVDM
PDFLDINHLRATGLQPGEEELPDIAPPIIIPDDPKDRTMNHFMESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVVPAFGGATSSGAAGLGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNNNLERALEWIFSRPELEEESEPALDMMDMEN
HANANILAETGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLRV
CASERPPKDQGYIYFYHRIPS
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtttctgggatttggaagggaacacattgaaaggcattaccggaaaacagga
cagtgtgtatatttgcacctgaagcgacatgtgagagagaaggtaccaggggcatctggt
ggagctttaccaaaaaggaagaatgctaagctatttttagatctagagacaaatggtgat
ctgaacggtgatgactttgaatacgaagatgaagcaaaacttgttatatttcctgatcac
tatgaaatctcattaccaaacatagaagaattaccagcactggtgacgatagcttgtgat
gcactcctcagcgcaaagtcgccctacaggaagcaggaccctgactcctgggaagaagag
ctacaggcatctaaacatgccaaaacacttgtacagttagacaatggtgttagaattccc
cccagtggttggaagtgctcaaaatgtgacctgcgggagaatctgtggctaaacctgaca
gacggttcggtgttgtgtgggaagtggttctttgatggcagtggagggaatggacatgca
gtggagcactacaaggagacggggtatcccctggcagtgaagttgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccagttttagatccgcacatagca
aagcatttggcacactttgggattgatatgctgcagatgcaagtgacagagaatggacta
agagataatgatataaaaccaagagtctcagaatgggaagtgattcaggaatctggagtg
aaactcaagcccatgtatggcccaggatatactggcatgaagaacctgggaaatagctgc
tacctcaatgctgtcatgcaaaccattttcagcatcccagagttccagagagcgtatgtg
ggaaaccttccaagaatatatgactactcccctcttgatccaacacaagatttcaacact
cagatggctaaactgggacatggcctcctttcaggccagtactctaagccacccatgaaa
tctgaccttattgaacaggtgatgaaagaagaacacaagccacaacacaatgggatatct
ccccgaatgtttaaggcttttataagtaaaggccacccagaattttcctctaatagacaa
caagacgcacaggagtttttcctacatcttataaatctagtagagaggaacccagtaggt
tcagaaaaccccagtgatgtcttccgattcctggtggaagaacgcacacagtgctgccag
tccagaaaggtgcgctacacagagagggtggactatatcatgcagttacctgttgcaatg
gaagcagcaacaaacaaagatgaattaattgcgtatgaactgaaaaggcgagaagcagaa
gctgcaaggagagctccaccagagcttgtccgtgccaagatcccatttagtgcatgcctg
caggctttttctgaaccaaacaacgtagaggacttctggagcagcgcccttcaagcaaaa
tctgcaggagttaagacttctcgttttgcttcatttcccgagtacttagttgtgcagata
aagaagttcacctttggccttgattggatacccaaaaagcttgatgtttctgtagacatg
ccagacttcctggatatcaaccaccttcgggccacgggtctccagccaggagaagaggaa
cttccagacattgctcctcccattatcattcctgatgatccgaaagatcgtacgatgaac
catttcatggagtctctagatattgatgagtcttcagttatgcaactggcagagatgggt
tttcctttggaagcatgtcggaaagccgtgtactatacaggcaacctgggtgctgaagtg
gctttcaactggatcattgcacatatggaagaaccagactttgctgagccattggttgta
cctgcgtttggaggagccacttccagtggagcggctgggttaggggctgttgggctggat
aaccagcctcctgaagagatggttgccattatcatttccatgggcttccaaaggaaccta
gcaattcaagcgctgaaggcaacaaacaataatttggagcgtgccctggaatggatcttc
agccgccctgaacttgaggaagagagtgagcctgctttggacatgatggatatggagaac
catgctaacgcaaatatccttgcagagacaggatcagagggacccaggatcaaagatggg
cctggaagatacgagctgtttgggttcatcagccacatgggaacatccacaatgagtggc
cactatgtttgtcatctcaagaaagaaggaagatgggtgatctacaatgaccttagagtc
tgtgcctcagaacgacctccgaaagaccagggctacatttatttttaccacaggatacca
agttag
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