Anser cygnoides (swan goose): 106032420
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Entry
106032420 CDS
T04896
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106032420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106032420
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106032420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
106032420
NCBI-ProteinID:
XP_047931607
LinkDB
All DBs
Position
3:61402006..61462074
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AA seq
687 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATCAEPLEEEYG
YEGTEDTAGYFASNHQLDEVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTHNEDAMIVGKTTKGKSRDSQSARMESEIVPKVTKMTVSGKKQSMGF
EVPCMIAEENGHANTPQKGLLNEDASITSGVIEAVSKSALSPQVAQVSEEQNAVPTPVKK
TSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDLTKWYTGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARILIFNIEVPITKG
FPVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVITEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgaggctacaactacgacgaagattttgaagatgatgat
gtgtatggccaatcagtagaagatgactattgcatttctccttcaacagccgctcagttt
atctactcaagacgagacaaaccagcaacatgtgctgagccattagaagaagaatatggc
tacgaaggtacagaagatactgctggttattttgcatccaatcatcagttggatgaagtt
gatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagagcaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggccttg
gatcttgtgctttcccaaggcagtaagcaaaatgtgaagacccacaatgaggatgctatg
attgtaggaaagacgacaaaaggaaaatcaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaagttaccaaaatgacagtgtctggaaagaaacagtctatgggattt
gaagttccatgcatgattgctgaagaaaatggccatgctaacacacctcaaaaaggactg
ctaaatgaagatgctagcataacttctggggtaattgaggcagtctcaaaatctgctctt
tcaccccaagtagcgcaggtttcagaagagcagaatgccgtgcctactccagtaaaaaag
acgagcaagacaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactactaaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatctactctaccttttgggaaatgtgaacaaaagaactatgcacaaatacgaacag
gaatctaagaaggctggcaaagcttcgtttgcttatgcatgggtcttggatgaaactggg
gaagaaagagaaaggggagtaacaatggatgtgggcatgaccaaatttgagacaaagact
aaagtaattacattgatggatgctccaggccacaaagacttcattccaaatatgatcaca
ggagctgcccaggctgatgtagctattttggttgtggatgccagcagaggagagtttgaa
gctgggtttgagacaggtggacaaactcgagaacatggattattagtgcgttctcttgga
gtgacacagctagctgttgcagtcaataaaatggaccaggtcaattggcagcaagaaaga
tttcaggaaattaccagtaagcttggccaatttcttaaacaagctggctttaaggaatct
gatgtggcttatattccaacaagtggtcttggtggtgaaaatctagtcacaagaagtcag
tcaagtgaccttacaaagtggtatacaggaaagtgtttgttagagcaaattgattctttc
aagccaccacaaagatcagtggataaaccatttagattgtgtgttgctgacgtttttaaa
gaccaaggatcaggattttgtgtgactggaaaaatagaagcaggctatattcaagttgga
gaacgacttctggcaatgcctcctaatgaaacttgcactgcaaaaggaatcacactgcat
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgttggctgtgtattttgtgatcccaaggagcccattaaagtt
tgcactcgattcagagctcggattctcatttttaatattgaggttccaatcactaaagga
ttccctgtgcttttacactatcagaccgtaagtgaacctgctactattagaagattattg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaagcctaagttcctgactaaa
ggccagaatgctttaatagaactacagactcaaaggcccgttgctctagagttgtataaa
gattttaaagagcttgggaggtttatgttacgctacagtggttctactattgctgcagga
gttatcacagagattaaagaatga
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