Anser cygnoides (swan goose): 106032617
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Entry
106032617 CDS
T04896
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X3
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106032617 (PRDM1)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106032617 (PRDM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
CapR
Motif
Other DBs
NCBI-GeneID:
106032617
NCBI-ProteinID:
XP_013031118
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Position
3:complement(74903778..75015526)
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AA seq
789 aa
AA seq
DB search
MKMDMEDADMTLWTEADFEEKCTYIVNDHPWDPSADGGTLTQAEASLPRNLTFKYASNCK
EVTGVISKEYIPKGTRFGPLVGEIYTSNTVPKNANRKYFWRIYSSGELHHFIDGFNEDKS
NWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSREL
TMMNLTQTHVNPKQHSADKDELYQKSIPKKEHSVKEILKMESNPPKGKDFFQTNISPVTP
EKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYGMDRPSYVTHSPIQSSTTPS
PSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHRESYSYLNGSYGSEGLGSYPGYAPPS
HLPSAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPLYGNLLSGGSL
SHHMLNPATLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGS
PTAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYE
CNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVC
HKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSY
IHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVEDNIDLTSVVE
KDILTMLRREMEGANLKVSLQRNLGNGLISSGCNLYESSDMSIMKLPHGHPLPLLPVKVK
QETVEPMDP
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggatgctgacatgactctgtggacggaagccgattttgaagag
aagtgcacgtacattgtaaacgaccacccatgggatcccagcgccgacggaggcacccta
actcaggcagaggcttccttgccaaggaacttgactttcaaatacgcatcgaactgcaaa
gaggtcactggagttataagcaaagagtacatcccaaaaggaacgcgctttggacccctg
gtaggagagatctataccagcaatacggttcccaagaatgcgaacagaaaatacttttgg
cggatctattcaagtggtgagcttcaccacttcattgatggatttaacgaggacaagagc
aactggatgcgttatgtaaaccctggctactccgttcaggaacagaacttggcagcctgt
cagaatggaatgaacatctacttctacactatcaagcccatccctgccaaccaagagctg
cttgtgtggtattgccgagactttgcagagaggctgcactatccctcctccagagagctg
acaatgatgaacctcacacaaacacacgttaatccaaagcagcacagtgctgataaagat
gagctctatcagaaaagcatcccaaagaaggagcacagcgtgaaagaaatcctgaaaatg
gaatccaatcctccaaagggaaaagacttcttccagaccaacatttcaccagttactcca
gaaaaagacttggatgacttgcgtaagaactatagcccagagaggtgtttcttccctcga
gttgtctacccaatccgacctcacattccagaagactatctgaaagcttccttagcatat
gggatggacagacccagctacgttactcactcgcccatccagtcatctactacaccaagt
ccttctgggaggagcagcccagaccaaagtttaaaaagttcaagccctcacagcagtcca
ggggtcacagtctcacctctggcacctacgtcccaggagcacagagagtcgtactcttac
ttgaacggatcctacggctcagagggcttggggtcttatcctggatatgcaccccccagc
catctcccgtctgcctttctaccgtcctataacccccactaccccaaatttctgttacct
ccattcaatatgagctgtaataacctgagcgctttgaacaatatcaatggcatcaacaat
ttcaatctcttcccgcggatgtatcctctctatggcaacctactcagcggaggtagcctt
tcccaccacatgttgaaccccgccacgctccccagttcactgcccagcgaaggaggccgt
cgtttgctgcagcctgatcatccaagagacttcctcataccagcacctaacagtgccttc
tctatcacaggcgctgctgccagcatgaaggacaagccgtgcagccccaccagcgggtca
cccacagctggtacagcagccagttcagaacacataatgcaacctaaacctacctcagtg
gtgttggccgccaccggcggtgaagaagccatgaatctcattaaaagtaagaggaatgtg
actggttacaaaaccctcccatacccactgaagaagcagaacgggaagatcaagtacgaa
tgcaacgtttgctccaagacctttggccagctctccaatctgaaggtgcacctccgagta
cacagcggagagagaccatttaaatgccagacctgcaacaagggcttcacccagctggct
cacctccagaagcactatctggtacacacaggagaaaaaccccacgagtgtcaggtttgt
cacaagcggttcagcagcaccagcaatctcaaaacccacctgcggctccactctggagag
aagccttaccagtgcaagctgtgcccagccaaattcacccagtttgtgcacctgaagctg
cacaagcgtctccacacgcgggaacgtccccataaatgcatccactgccacaagagctac
attcacctctgcagcctccaggtccatctgaagggcaactgcccggtcgcccctgcctcc
ggcctctcaatggaggacctgaatcgaatcaatgaggagatcgagaagttcgacatcagt
gacaatgccgacaagttggaagaagtggaggacaatatcgacttaacatcggttgtggag
aaggatatactgaccatgctcagaagggaaatggaaggagctaatctcaaagtatcttta
cagaggaacctgggaaatggacttatctcctcaggatgcaacctttacgagtcttcggat
atgtcaattatgaagttgcctcacggtcacccactacctctgttacctgtaaaggtcaag
caagaaacagttgaaccaatggacccttaa
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