Anser cygnoides (swan goose): 106032771
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Entry
106032771 CDS
T04896
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03440
Homologous recombination
acyg03450
Non-homologous end-joining
acyg04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106032771 (RAD50)
03450 Non-homologous end-joining
106032771 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106032771 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acyg03032
]
106032771 (RAD50)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106032771 (RAD50)
DNA replication proteins [BR:
acyg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106032771 (RAD50)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106032771 (RAD50)
BRCA1-C complex
106032771 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
106032771 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
AAA_29
NPV_P10
AAA_24
DUF2703
AAA_13
Motif
Other DBs
NCBI-GeneID:
106032771
NCBI-ProteinID:
XP_013031302
UniProt:
A0A8B9D643
LinkDB
All DBs
Position
14:complement(1786875..1807798)
Genome browser
AA seq
1312 aa
AA seq
DB search
MARIEKMSILGVRSFGIEDKDKQIITFLNPMTILVGPNGAGKTTIIECLKYVSTGDFPPG
TKGNSFVHDPKVAHETDVRAQIRLQFRDVNGELLAVQRSMVCTQKNKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVLNNVVFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQSLKVKECQTELKYLKQNKEKAQEIQDHLNNREAQLSASKEN
VKSIESQLDPLKCSLAAVEKNLMKVMLLDNDVKALESRRRQMDKDNRDLQQKMEKVFQGT
DEQLRDRYQNHQRTVKEKEKRLSDCKRELDRAVKECQRFNSEKSELLVERGRLQLQADRH
QEHIKMRDSLIQSLAAQLELDGFELSPLNERQITSFHRLLKERQARDTETANHLMREFAQ
KEVMKQKQIDEIRDKKTGLERTIDLKSDIQNKRHAELKNVKHELQQLEGSSGRIVELDQE
IVKTEHELEKTERSSNVEALELEVQTLQNEKINLDKVLRKLDQEMEQLNLHTTTITQMEM
LKKDKGDKEEQIRKVKSRHSEELTLLLGYFPNKKQLEDWLHGKNREINETRDRHAKLNKQ
LASAEQQKNFISAELRKKEEQLSSYEAKLFDVCGSQDFDSNLNKLQDEIEKSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
RREKKRDEMMGLKPIRQTVVELQERDIPDLRNKLQTVNRDFARLKGEIEEQETLLHTVLS
EKEGANACLQDITLMERYQADIRDVERKIAQQEAKLLGVDLSRTVLQVSQEKQEKKHLWD
TVTSKIELNQKIKQDQQNQIQQLKSTVNELRAEKLQISSSMQRRQQLEEQIVELTTEVQS
LCREIKEAKEQVFPLHETLEKLQQDKEDLINKRTATNKETQEKINSIKEKVKDINKYMKE
IESYVQEGKEDYKKQKESELDEVNSQLVACEKQKEKITKEMEIIRQDIDTQKIQERWLED
NLTLRKRNEELKEVEDNINRLMKEMGEMKVPQMKNEQKQLEEKIEALKRNHHVALGRQRG
FEEEIVRFKKELRESQFKDAEEKYREMMIVMRTTELVNRDLDTYYKALDKAIMTFHSMKM
EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSAADKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRTKQR
NFQLLVITHDEDFVELLGRSEYVETFYRIRKNDDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggattgagaaaatgagtatcctcggggtgaggagttttggcatagaggataaa
gacaaacagattatcactttccttaatccaatgactattttggtgggaccaaatggtgcg
ggaaaaacgactatcattgagtgccttaaatatgtatctactggcgattttccccctggc
accaaaggaaattcatttgttcacgatccaaaggttgcccatgaaactgatgttagagct
cagattcgattacagtttcgagatgttaatggagagcttttagctgtccaacgatccatg
gtttgtacccagaaaaacaagaaaacagaatttaaaacacttgaaggggtcattactaga
acaaagcatggcgagaaggtcagtctcagttccaagtgtgcagaaattgatcgagagatg
atcagtgcccttggtgtttccaaatccgtgctcaacaatgttgttttctgccaccaagaa
gattccaactggccattaagcgaagggaaggccttgaaacaaaaatttgatgagatcttc
tcagcaacaaggtatattaaagcactggaaactctccgtcaggtacggctgaaacaaagc
ctaaaagtaaaagagtgtcagacagaactgaagtacctaaaacagaataaagaaaaagca
caggaaatccaggaccatcttaacaatagggaagctcagctgtctgcttctaaagagaat
gtaaaatctatcgagagtcagctggatcctttaaagtgttctctggcagcagttgaaaag
aatctcatgaaagtaatgttgctagacaacgacgtaaaagctctggagagcaggaggagg
cagatggataaagataatcgagatctgcaacagaagatggaaaaggtttttcaaggaacg
gatgaacagctgagggatagataccagaaccaccagaggacagtgaaggagaaggagaag
agattatcggactgtaagcgtgaattagatagagccgttaaagaatgccagaggtttaac
agtgaaaagtcagaattactcgttgaacgaggtcgtttacaactgcaagcagatcgtcat
caagaacacatcaaaatgagggattcattaattcagtctttggcagcacaactagaatta
gatggttttgagctatcgcctcttaatgaaagacagattaccagttttcacaggttattg
aaggagagacaagcgagagatacagaaactgcaaatcacttaatgagagaatttgcacaa
aaagaagtgatgaaacaaaaacagatagatgaaataagagataagaaaactggattagaa
agaaccattgatctgaaatcagacatccaaaacaagagacacgcggaactgaagaatgta
aaacatgaattgcagcagttggaggggtcatcaggcagaattgtggagttggatcaggag
attgtcaagacagaacatgaactggagaagactgagaggagcagcaatgtagaagcactt
gaactggaagtgcaaactctgcaaaatgagaaaataaacctggacaaagttcttcggaag
ctggatcaagagatggaacagttgaacctacataccacaacaattacccaaatggagatg
ctgaagaaagacaaaggagacaaagaggaacagattagaaaagtaaaatcaagacattct
gaagaactgacgttactgctgggatactttccaaataaaaaacaacttgaagactggctt
catggcaaaaatagagagatcaatgaaacaagggacagacatgccaagcttaacaaacaa
ctggcatcagcagaacaacagaagaattttatcagtgctgaactaagaaaaaaagaagaa
cagttgtctagctatgaagcaaaactttttgatgtttgtggaagccaagattttgacagt
aacctgaacaaacttcaagatgaaattgaaaaaagttcaaaacagcgagctgtgcttgct
ggagccaccgcagtttattcacagttcattacacaactgacagaagagaatcagtcgtgt
tgcccagtttgtcaaagagtttttcaaacagaggctgaactgcaagatgtaattagtgat
cttcagtctaagttgcgtcttgctccagacaaattgaagtcaacagagtctgagcttaaa
agaagagagaaaaaacgtgatgagatgatgggtctcaaaccaattaggcaaactgtagtg
gaactccaagaaagggacataccagacttgaggaacaagctgcagactgtaaacagggat
tttgcacggctgaagggtgagatagaagagcaggaaacactcttgcacacagttttgtct
gagaaggaaggtgctaatgcatgtttacaggacataacgctaatggaaaggtaccaggct
gatattagggatgttgaaagaaaaattgctcagcaggaggctaagttgctaggggttgat
ttaagtagaaccgttctacaagtaagccaagaaaaacaagagaagaaacacttatgggat
acagttactagtaaaattgagttaaatcaaaaaatcaagcaagaccagcaaaatcagatt
cagcagcttaagagtacagttaatgaacttagagcagagaaacttcagatttccagcagc
atgcagcgtcgtcaacaactggaggaacaaatagtggaattaaccactgaggttcagtcc
ttatgtagagagattaaggaagcaaaagaacaggtatttccactacacgaaactttagaa
aaactgcagcaagacaaggaggatctaattaataaaaggactgcaactaataaagaaaca
caagagaagataaatagcataaaagagaaagttaaagatataaacaagtacatgaaagaa
atcgaaagctatgttcaagaaggaaaggaagactacaagaagcaaaaggaatctgaactt
gatgaagtaaactctcaattagttgcctgtgagaaacagaaggaaaagataactaaagag
atggaaattattcgacaagatattgacactcaaaagatacaggaaaggtggctagaggat
aatcttactttgaggaagcggaatgaagagttaaaagaagttgaagacaatataaataga
cttatgaaggagatgggagaaatgaaagtcccgcagatgaaaaatgaacaaaaacagtta
gaggagaaaatagaagctctgaaaagaaaccatcatgttgcccttggccgacagcgtgga
tttgaggaagagattgttcggtttaaaaaggaacttcgagagtcacaattcaaagatgca
gaggaaaaatacagggagatgatgattgttatgagaacaacggagctagtgaacagagat
ttggacacttactacaaggctcttgataaggcaataatgacatttcatagcatgaagatg
gaagaaatcaacaaaataattcgtgacctttggagaaatacctacagaggacaagatatt
gaatatatagaaattcgctctgatgcagatgagaatgtttcagcagctgataaaagaaga
agttacaattatagagtagtaatgataaagggagatacagcactggatatgagaggaaga
tgtagtgctgggcaaaaggtgcttgcttctcttattattcgtctggctctagcagaaacg
ttctgtctcaactgtggcatattggcactagatgagcctactaccaatcttgatcgagaa
aacattgagtctcttgcccatgccctcgtggagataataaaaagccgcacaaaacagcgt
aactttcagcttctggtgataactcatgatgaagattttgttgaactgctgggccgttct
gaatatgtggaaaccttctacaggatacggaagaacgatgaccagtgctctgagatcatg
aaatgcagtgtcagctcccttggctcatacgttcattag
DBGET
integrated database retrieval system
