Anser cygnoides (swan goose): 106033141
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Entry
106033141 CDS
T04896
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106033141 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106033141 (EDC4)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106033141 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
106033141 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
Uteroglobin
WDR55
Motif
Other DBs
NCBI-GeneID:
106033141
NCBI-ProteinID:
XP_066860444
LinkDB
All DBs
Position
12:12201962..12241129
Genome browser
AA seq
1402 aa
AA seq
DB search
MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSL
AKPVHRSISLGALQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYALRAASNGSAMVRVLSISTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLSMDKDKIQEEILVNIKRPENTPLNTSRRIIWCPFI
PDDNEENGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPNIKEGFIVVKGHSTYLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVCFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSH
EEFAFPDHIADLGTEGLGSEKGSVHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAF
MTPSASLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLSDKLTPKAPVPVTPGNSSLALELQEVEPLVVPQASPTRERS
PDVISSASTAMSQDIPEIASETLQRSFTAAPSGLPAEVLEPNHHADSMASAASALHLLSP
RNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENACSDSVVGQPWPAAPDITRETRN
SMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKAS
TQRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNHQVTPEFQDELMCILRSQQR
ELSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQL
QEHLSQQLSQSLSTAVCNRLERTVREEMKKTVPQCISKSMDPVASQLSNTIATKLTAVEG
TLKESITKLVKSKNLTDSIVRATADTLQGTIQSAYREAFQSVVLPAFEKSCQSMFQQIND
TFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSTTEQLASTVTASVHAE
VQHQLHIIVGNLQESILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHL
DFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQHPCPLSQPVLL
SLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLLQFLQVEPHN
TLSKPARRLMIMLQGLVTPGMT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccaacagcatcgacatcgaggacgcgacgcagcacctgcgggacatcctc
aagctggaccggccgggaggttcagtaaacgagaaccagagaccgtcaaattcctataat
ggagacctgaacggactgctggtgcctgatcccatcgtggccggcgatggaccttctttg
gcgaagccggtgcatcgcagcatttccctgggagccctgcaggagaagcaagtcatctgc
ctttctggtgatgacagctccacttgcatagtaatatcagcaaaagatgtggagatagta
gccagcagtgattccagcatcacaagtaaggccagaggaagtaacaaggtgaaaatacag
cctgttgctagatacgactgggagcagaaatactattatggcaatctgatagctgtttca
aactcttacctggcttatgcccttagagctgccagtaatggctccgccatggtgcgagtg
ttgagcatcagcactgctgagaggaccttgctgaagggattcacgggtggcgtggcagac
ctggcttttgctcatctcaactccaaccagctggcgtgcctggatgaggctggcaacctt
tttgtctggcgcctgtccatggataaagacaaaatccaagaggagatcttggtgaacatc
aaacgacctgagaataccccgttgaacacctctcggagaatcatctggtgtcctttcatc
ccagatgataatgaagagaatggtgaagagggaagtcaaacattggcattgctgcatgag
gacagggcagaggtatgggatttggacattatccgaacaaacaacagctcctggccagtg
gaagtgcctaacatcaaagaaggcttcatcgtagtgaaaggccacagcacgtacctgagc
gagggagcgctttctccagatggaactgtgttggccacagcaagtcatgatggttttgtc
aaattctggcagatctatattgaagggcaagatgagccaaggtgtcttcatgagtggaaa
ccacatgatggtaggcctctttcctgcctgctcttctgtgacaaccataaaaaacaagac
ccagaggttcccttctggagatttctcatcacaggagcagatcagaatagagaactgaag
atgtggtgcactgtgtcttggacgtgtctgcagactgtctgcttttctcccgacatcttc
agctccatgagtattcttcccagcctgaaagtctgcctggacctctctgctgagtatctg
atactgagtgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
gagggcaaagcttacttcagctccatctcagagttcctcctcacccacccagtcctaagc
ttcggcatccaggcagtgagccgctgccgcttaaggcacactgaagtgctcccagcagaa
gaggaaaacgacaacttgagtgtagaaggtgctcagggagcaggggctgttgagtcagcg
gcaggcgtgctgataaaactcttctgtgtgcacactaaggccctacaggatgtgcagatt
agattccagcctctccatagtcctgatatgggtgcatctgtgccttcccatggctctcat
gaagaatttgcctttccagaccacatagctgatctaggcacagaagggctgggatctgaa
aaaggatctgttcatggctctcaaccagacctgcgacgtattgctgacctgcctgtacca
gcagactttcttgctctctcaaatgatgccaaaccaaagttgatgacgccagatgcattc
atgacaccaagtgcatctcttcaacagatcactgtatctccaggcagcagcgtcagttcc
ctgactgcagtcacagccatgagtagcacttctgtcactgacgcctctatgtccaggcca
tcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacgctgagcagc
agcagcagcagtctccagactagtcctaggagccattcagttcttatcccgggcctctct
gacaagctaacaccaaaggcacctgttccagtcacaccaggaaattcctctctagcactg
gaactgcaggaagtggagcccttggtggtgccccaggcttctcccacccgtgagcgttct
ccggatgtcatttcctctgcttccacagccatgtcccaagatatcccggagattgcttcc
gagaccttgcaacgcagcttcacagcagctccatctgggctccctgcggaggtgctggag
cccaatcatcatgcagacagtatggcatctgctgcctcagccttacatttgctgtctccg
aggaaccggcacaattctgagcatagccaccactctttggacatgcctccagtggaggta
gacagactgaatgctccatcgttactggagactgctttaactcaggaaaatgcatgttct
gacagcgttgtgggtcagccatggccagcagctcctgacataaccagagaaactaggaac
agcatggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctatcat
cgacacagctaccacctgctgcagcatgacagccaggatgctagtgcagaacaaagtgac
catgatgatgaagttgcaagtttggcttctacgtcaggtggatttggtgccaaagcgtct
acgcagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaag
ctaaagcggaagggcaagaaagatgacggggatgtgaaccagtcaccaagatcatctaac
caccaggtgacaccggagttccaggacgagctgatgtgtatactgaggagccaacagcgg
gagctctctgagctgcgtcagaaccagatggagctgctgcagagactcactgatcacctt
gatgccattcagagctccctcatgggccatgtggagagggtgattgactcccagcaggag
caggagcagagaagactggaccgagcactgacggaaggacagcagcgcaatgggcagctc
caggagcatctgtctcagcagctctctcagtccctttccactgctgtgtgtaaccgcctg
gagaggaccgttcgtgaggagatgaagaagacagtgccccagtgcatttccaagagcatg
gaccctgttgctagccagctgagtaacactattgccaccaagctcactgctgttgagggg
acgctgaaagagagcatcaccaagctagtgaaatcaaagaaccttacagatagcattgtg
agggcaacggctgacaccctgcaggggacaatccagtcagcctacagggaagcgttccag
agcgtggtgttgccagcctttgagaagagctgccagtccatgttccagcaaatcaatgat
accttcaagcagggcacacaggaatacatccagcagcttgagactcacatgaagaacaag
aaggcgcgagaacaggaggcccgggacccgttgctgaatcagcttcgacagctcatcagc
accttccagagcaccaccgagcagctggcttccactgtcacagccagcgtacacgctgag
gtgcagcatcagctgcatattatcgtgggcaacctgcaggagtctattttggcccaggtg
cagagagtcattaaaggagaagtgagcctggctatgaaggagcagcaagcagcagtgacc
tcaagcattgtccaggcaatgcgctcagcagcagggactccgatcccctctgctcacttg
gacttccagtctcagcaaactcacatccttcagctgctccagcaggggcacctcaaccaa
gctttccagcaggctctaacagcagctgatctcaatctggtcctgtatgtttgtgagaca
gtggatactcagcaagtgtttggacagcatccatgcccgctgtcccagcctgtgctgctc
tctctcattcagcagctctcctcggatttaggtactcgtacggaactgaagctgaattac
ttggaggaagcggtgatgcacctggaccacagtgaccccatcacccgagaccacatgggg
tcagtcatgaaccaggtgcggcagaagctcttacagttcctgcaggtggaaccccacaac
acgctgagcaagcctgcccgccgcctcatgatcatgcttcagggcctggtcactcctggc
atgacctag
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integrated database retrieval system
