Anser cygnoides (swan goose): 106033725
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Entry
106033725 CDS
T04896
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X3
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acyg04040
]
106033725 (TRPM1)
Ion channels [BR:
acyg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106033725 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Glutaredoxin2_C
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
106033725
NCBI-ProteinID:
XP_047916003
LinkDB
All DBs
Position
11:16484806..16622894
Genome browser
AA seq
1632 aa
AA seq
DB search
MGQKAWIEKTFSKRECIYVIANSKDISRCCCGQLINQHIPPPPSITANKNGEETKQVEAQ
PEKWSVSKHTHTYPTDAYGNLEFQGGGHSNKAMYIRVSYDTKPDSLLHLMVKDWQLELPK
LLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTGAWIFTGGVSTGVIRHVGDALKDHSSK
SRGRICAVGIAPWGIVENKEDLIGKDVTRVYQTMSNPLSKLSVLNSSHTHFILADNGTLG
KYGAEVKLRRQLEKHISLQKINTRLGQGVPVVGLIVEGGPNVISIVLECLREEPPLPVVI
CDGSGRASDILSFAHKYSEEGGVISESLRDQLLVTIQKTFNYSRNQAHQLFIILMECMKK
KELITVFRMGSEGQQDIEMSILTALLKGTNASAPDQLSLALAWNRVDIARSQIFVFGHHW
PPLGSLTATEGTAPEKEKKSPAAQTKAARGKGKGKKKGGKAKEEPEEETDPRKLELLNWV
NSLEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYNTRLGPPNTLHLLVRDVK
KGNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKSFRTLYNNLFGPKRPKALKLLGMEDD
EPPTKGKKKKKKKEEEIDIDVDDPEVSRFQYPFHELMIWAVLMKRQKMALFLWQRGEETM
AKALVACKLYKSMAHESSESELVDDISQDLDNNSKDFGQLAVELLDQSYKHDEQIAMKLL
TYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNPGLKVIMGILFPP
TILFLEFRSYDDYSYQTSRENEEGKEKEDENVDANVDTGSRKGDEENGNKKQNSLPIGTK
IYEFYNAPIVKFWFYTISYLGYLMLFNYIILVRMERWPSVQEWIVISYIVTLALEKVREI
LMSEPGKLSQKVKVWLQEYWNITDLVAISVFMIGAILRLQNQPYMGYGRVIYCVDIIFWY
IRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFGVARQAILHPDEEPSWRLA
RNIFYMPYWMIYGEVFADQIDRKSRIHTPCGDNLYDEDGKRLPPCIPGAWLTPAIMACYL
LVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHDRPVLPPPMIIFSHLYII
IKRVCCRCKKREGDQDERDRGLKLFLNDEELKKLYEFEEQCVEEYFQEKEDEQQSSNDER
IRVTSERVENMSMRLEEVNEREHFMKASLQTVDLRLSQLEELSGRMVNALEKLAGIDKSE
LTYTRSRASSECDAAYLLRQSSVNSSDGYSMYRYHVGGDELTYDDSTTPMSPAIGLCKKA
HSVGTKQDGADPRMLVRENQTSLHYTSNANAVNPSDYSRSTLEIEQNVSRCHSGSGILGD
ENQGIFKNDETVPRSINQMDVVISRQSVPKPDFQNTQLKVERTKLEATISYPLDKSKAMR
YFPPETFSACQTTMMKSRSFIFARGGKLVGGVNNWTTEYSTIMDQVCPSTIEQWATEWKY
EVEQQLSQEHPPEYPGFVSEAERHAEQKQLQMDTDDDSDVGEAGISASYTSAPATVKAQK
ENLLSVKADRTSGFPSVRSKSLHSHSRKAKSVKDKLNRPGHASSVTNLVVAFGSAMEEQK
ARQENASTETEC
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaggcttggatagagaaaaccttttcaaaaagagaatgcatctatgtaatt
gccaacagcaaagacattagcaggtgctgctgtggacagctaattaaccagcatattcca
cctcctccaagtataacagctaataaaaatggggaagaaacaaagcaagtggaggctcaa
ccagagaaatggtctgtcagcaaacacacccatacatacccaactgatgcctatggaaac
cttgaattccagggaggaggacattcaaataaggccatgtatatccgtgtgtcatatgac
accaaaccagattctctgctgcatctcatggtgaaagactggcaactagaattgcccaaa
ctcttaatctctgtccatgggggcctccagaactttgaaatgcaaccgaaactgaagcaa
gtgttcggaaaaggtctgataaaggctgccatgaccaccggagcctggattttcactgga
ggtgttagtacaggtgtcattcgtcatgtgggagatgccttgaaagatcattcttcaaaa
tccagaggacgaatctgtgcagtaggaattgcaccatggggcattgtagaaaacaaggaa
gatctgataggaaaagatgtaacacgtgtttaccaaacaatgtcaaaccctctaagtaag
ctctctgtgctcaacagttcccatacacatttcattctggcagacaatggtacactaggt
aaatatggagctgaagtaaagctacgacgtcagttggaaaaacatatttccctccagaaa
attaatacacggctgggacaaggtgttcctgtagttggacttatcgtggaaggtggtcct
aatgttatctccattgtcctggagtgtctacgagaagaacctcctcttcctgttgtgata
tgtgatggtagtggacgagcatctgatattctgtcatttgcacacaagtattcagaagaa
ggaggggtaataagtgaatccctcagggaccagctactagttacaatccagaaaaccttc
aactacagcaggaatcaagctcatcagctgttcatcattcttatggaatgcatgaaaaaa
aaggaacttatcactgtgttccgtatggggtctgaagggcaacaggacattgagatgtct
atcttaactgctctcctcaaaggtaccaatgcatctgctccagaccagcttagcttggct
ttggcctggaatcgtgttgacattgcacgcagccaaatcttcgtcttcggacaccactgg
ccacctttaggaagccttacagctactgagggtacagcccctgagaaggaaaagaaatct
ccagcagctcagactaaagcagccagggggaaaggaaaagggaagaaaaaaggaggaaaa
gcaaaagaagagccagaagaagaaacagatccaagaaagcttgaactcctgaactgggta
aattctctggagcaggctatgctggatgcactggttctggatcgagtggacttcgtgaaa
cttctcattgagaatggagttaacatgcaacacttcctcactattcctcgactggaagaa
ctttataatactagattgggccctccaaatacgctgcatttgctagttagagatgtgaaa
aagggaaatcttccaccagattatcatatcagcctaatagatattggtcttgtacttgaa
tatctcatgggtggagcttatcgctgcaactatactcgaaaaagttttcggactctttat
aataatttatttggaccaaaaaggccgaaagctcttaaactactagggatggaggatgat
gagcctcccacaaaaggaaagaagaagaagaagaaaaaggaggaagagatcgatattgat
gtggatgacccagaagtcagccgctttcagtatccatttcatgaacttatgatatgggct
gtgctgatgaaacggcaaaagatggcactcttcctttggcaacgaggagaggaaaccatg
gccaaggcacttgttgcctgtaagctttacaaatctatggcccatgagtcttctgagagt
gaactagtggatgacatctctcaggatctggacaacaactcaaaagattttggccagctg
gcagttgagctcttggatcagtcctacaaacatgatgagcagattgccatgaaactactg
acctatgaactgaaaaattggagtaattctacctgcctgaaactggctgtggcagctaaa
cacagggacttcattgctcacacatgcagtcagatgcttttaacagatatgtggatgggg
cgactacgtatgcggaaaaacccaggacttaaggttataatggggattctcttccctcct
accatccttttcctagagtttcgcagttacgatgattattcttaccagacatcaagagaa
aatgaagaaggcaaagaaaaagaggacgaaaatgtggatgcaaatgtggatacaggctcc
cgaaaaggagatgaagagaatggaaataaaaagcagaacagccttccaattggaacaaag
atctatgagttctataatgcacctattgtcaaattttggttctacacaatatcatacctg
ggttacttgatgctatttaattatatcatcttggtgcggatggaacggtggccgtcagtc
caggaatggattgtcatctcttacattgtgacactggctttagagaaagtaagagagatt
ctgatgtcagagccaggaaagctgagccaaaaagtgaaagtttggctccaggaatactgg
aatattactgacctggtggctatttcagtatttatgataggagcaattcttcgcctacag
aaccagccttacatgggttatggaagagtgatttactgtgtcgatataattttctggtac
attagagtactagatatctttggtgtgaacaagtatctgggaccttatgtcatgatgatt
ggaaagatgatgattgacatgctctacttcgtggtgatcatgcttgttgttctaatgagt
tttggagtagcccgtcaagctatcctgcatccagatgaagagccttcttggagactagct
cgcaacatcttctatatgccctattggatgatctatggagaggtgttcgcagaccagata
gaccgtaagagtagaattcatactccttgtggagacaatctttacgatgaggatggtaaa
cgcctccctccatgcataccaggggcctggctcactccagctattatggcctgttacctc
ttggtggcaaatatcctcctggtaaacctgctgattgctgtcttcaacaataccttcttt
gaggtaaaatcaatatccaaccaagtctggaagttccagcggtaccagctgattatgaca
ttccatgacagacctgtcctcccaccgccgatgattatcttcagccacctgtacataatc
atcaagagagtctgctgtcgctgcaagaagcgtgaaggagaccaggatgagcgtgacaga
ggactgaagttatttctgaatgatgaagagctaaaaaaactgtatgagtttgaagagcag
tgcgtagaagaatacttccaggaaaaagaggatgagcagcagtcatctaatgatgaacgc
atcagagttacctctgaaagagttgaaaatatgtctatgaggctagaagaagtgaatgaa
agagaacactttatgaaagcctctctccaaacagttgaccttcgactctctcagttggaa
gaactctctggtcggatggtgaatgctcttgagaagctggcaggtattgacaagtctgag
ctgacatatacgcgttcacgggcttcatctgagtgtgatgctgcgtatctcctgaggcaa
agcagtgtcaacagctctgatggctacagcatgtatagataccacgttggtggtgatgag
ttaacatatgatgacagtaccactcctatgtcaccagccataggattgtgtaaaaaagcc
cattctgttggtacaaaacaagatggagcagacccaaggatgctggttcgagagaaccag
accagtctccattatacctctaacgctaatgcagtcaacccatcagattacagtagatct
acattagaaattgaacaaaatgtttccagatgccactctggttcgggtattttgggggat
gaaaaccaagggattttcaagaatgatgaaacggttcctcgaagtataaaccagatggat
gttgttatcagcagacagtcagtacccaaaccagattttcagaacactcagttaaaagta
gaacggactaagttagaagcaacgatctcttatcccttggacaaatcaaaagcaatgcgc
tattttcctcctgaaacattcagtgcttgtcaaaccactatgatgaagtcgaggagcttt
atatttgcaagaggcggaaagctggttggaggagttaacaactggactactgagtatagt
accatcatggatcaggtatgcccttctacaattgagcagtgggccacagagtggaaatac
gaagttgagcagcagctttctcaagaacatcctccagagtaccctggttttgtctctgaa
gcagaaaggcacgcagagcagaaacagttacagatggacacagatgatgacagcgatgtt
ggtgaagcaggtattagtgcctcttacacgtctgcacctgccactgtcaaggctcagaag
gagaacttactatcagtaaaggcagacaggacttctgggttcccatcagtacggtccaag
agtttgcacagccattctcggaaagccaagtctgtaaaggacaaattaaacagaccagga
cacgccagtagtgtaactaacttagtggtcgcatttggcagtgcaatggaagaacagaaa
gctaggcaagaaaatgcatccacagaaactgagtgttga
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integrated database retrieval system
