Anser cygnoides (swan goose): 106033820
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Entry
106033820 CDS
T04896
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106033820 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106033820 (CLP1)
Enzymes [BR:
acyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
106033820 (CLP1)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
106033820 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_18
MMR_HSR1
ATP_bind_1
TniB
AAA_16
AAA_22
CbiA
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-GeneID:
106033820
NCBI-ProteinID:
XP_047906008
UniProt:
A0A8B9DY25
LinkDB
All DBs
Position
5:complement(12538724..12542980)
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AA seq
425 aa
AA seq
DB search
MAEDGGEEKKQVAKFELERETELRFEVEASQTVQMELLTGMAEVFGTELTRNKKFTFDAG
AKVAVFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSL
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSMADSADDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacggcggcgaggagaagaagcaggtggccaagttcgagctggagcgcgag
acggagctgcgcttcgaggtggaggcctcgcagacggtgcagatggagctgctgaccggc
atggccgaggtgttcggcaccgagctgacccgcaacaagaagttcaccttcgacgccggc
gccaaggtggccgtcttcacctggcacggctgcaccgtgcagctcagcgggcgcaccgag
gtggcctacgtgtccaaggacacccccatgctgctctacctcaacacgcacacggccctg
gagcagatgcggcggcaggcggagcgcgaggacgagcgggggccccgcgtcatggtggtg
ggccccacggacgtgggcaagtccaccgtgtgccgcctgctgctcaactacgccgtgcgc
ctggggcgccggcccaccttcgtggagctggacgtgggccagggctccgtctccatcccc
ggcaccatgggcgccctctacatcgagcggccggcggacgtggaggaagggttttccctc
caggctccgctggtctaccacttcggctccaccacgcctggcaccaacatcaagctctac
aacaagatcacgtcccggctggccgacgtcttcaaccagcggtgcgaggtgaaccgccgc
gcctcggtgagcggctgcgtcatcaacacgtgcggctgggtgaagggctcgggctaccag
gcgctggtgcacgccgcttccgccttcgaggtggacgtggtggtggtgctggaccaggag
cggctctacaacgagctcaagagggacctgccccactttgtgcgcaccgtgctgctcccc
aaatccggcggggtggtggagcgctccaaggacttccgccgcgagtgcagggacgaccgc
atccgcgagtacttctacggcttccggggctgcttctacccacacgctttcgacgtcaag
ttctccgacgtgaagatctacaaggtgggggcccccaccatcccggactcgtgcctgccc
ttggggatgtcgcaggaggacaaccagctgaagctggtgccggtgacgccgggcagggac
atggtgcaccacctgctgagcgtcagcatggccgacagcgccgacgacaacatctccgag
accagcgtggccggcttcatcgtggtcactggcgtcgacctggagcgccaggtcttcacc
gtgctctcgcccgcgcctcgccccctgcccaagaacttcctcctcatcatggacattcgc
ttcatggacctcaagtag
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integrated database retrieval system
