Anser cygnoides (swan goose): 106033910
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Entry
106033910 CDS
T04896
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106033910 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106033910 (CSTF3)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106033910 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
106033910
NCBI-ProteinID:
XP_013033143
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All DBs
Position
5:7510217..7561185
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AA seq
725 aa
AA seq
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MGRGTALHARGAAHTATAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARK
TYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETK
GKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVY
QRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDR
NAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPD
IWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES
RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVY
VTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT
SGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMD
LYPCSASELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPF
QPRHLAPPGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKLPDTV
DEAVRIITGGLPEITVEGNGPVENNAMLNKGVKRPNEDSDDDEEKGSVVPPVHDIYRARQ
QKRIR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgggacagcactacacgcccgaggcgcagcccacacggccacggctgccgaa
tatgtcccagaaaaagtgaagaaagctgaaaagaaattagaagagaatccatatgacctt
gacgcttggagcattctcattcgagaggcacagaatcaacctatagacaaagcacggaag
acctatgaacgccttgttgcccagttccccagttctggcagattctggaaactgtacatt
gaagcagagattaaagcaaaaaattatgacaaagtggaaaagttatttcagcgatgcctt
atgaaggttttacacattgatttatggaaatgttacctttcctatgtacgagaaaccaag
gggaagctacctagctacaaagaaaaaatggctcaggcatatgattttgctctggataag
attggcatggaaatcatgtcatatcagatctgggtggattacatcaattttttgaagggc
gtagaagcagtaggatcttatgctgaaaaccagaggataacagctgtccgtagggtttac
cagcgtgggtgtgtgaatccaatgattaacatagaacagctctggagagattataacaaa
tacgaagagggaatcaatattcacttagctaagaagatgattgaagacaggagtagagat
tatatgaacgcacgacgtgtagcaaaggaatatgagacagttatgaaaggcctggaccgc
aacgctccttctgtccccccacaaaataccccacaagaggctcagcaggtagacatgtgg
aagaaatacatccagtgggaaaagagcaacccactacgcacagaagatcaaactctcata
acaaaaagagttatgtttgcctatgagcaatgccttttggttctgggacatcacccagat
atctggtatgaagctgcacagtatcttgaacaatctagtaagctgctagctgaaaaaggg
gacatgaacaatgccaaacttttcagtgatgaggctgctaatatttatgaaagagcgatc
agcactttactaaagaagaacatgcttctttattttgcatacgcagattatgaagagagt
cgaatgaagtatgagaaagtacacagcatatataatcgactcttggctattgaagatatt
gatcccactctggtttatatccaatatatgaaatttgcaaggcgagcagaaggcataaaa
tctggaagaatgatatttaagaaagcaagagaagatgcccgaacccgccaccatgtctat
gttacagcagctttaatggagtattattgtagtaaggataagtctgtggcctttaagatt
tttgagctggggctgaagaaatacggggacattccagaatatgtactggcatatattgac
tacctgtctcaccttaacgaggacaataatacaagagttttgtttgaacgtgttttaact
tcagggagcctcccacctgagaaatctggggaaatctgggctcggtttttagcttttgaa
agtaacattggtgatctagctagtatactgaaagtcgaaaaacggaggtttacagcattc
aaggaagaatatgagggtaaagaaacagccctgctcgtagacaggtataagttcatggac
ttgtacccttgctctgcaagtgaacttaaggctcttggttataaggatgtctctcgtgcc
aagctggcagctataattccagaccctgtggttgcaccgtccattgtgcctgttctcaaa
gatgaagtagacagaaagcccgaatatccaaaaccagacactcaacaaatgattccattt
cagccaagacacttagcacctccaggtttacatcctgtaccaggtggtgtatttcctgtt
ccaccagcagctgtagttctaatgaagcttctgccacctcccgtttgttttcagggtccc
tttgttcaagtggatgagctcatggagatatttagaagatgcaaactgccagacactgtt
gatgaagctgtgcgaataattactggaggcctacctgaaataactgtggaaggcaacgga
cctgtggaaaataatgctatgctcaacaagggtgtcaagagaccaaatgaagattctgac
gacgatgaggagaaaggctcagtagttccccctgtacacgacatttacagagcacgacaa
caaaagagaatccggtga
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