Anser cygnoides (swan goose): 106034239
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Entry
106034239 CDS
T04896
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106034239 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106034239 (ARID1B)
03021 Transcription machinery [BR:
acyg03021
]
106034239 (ARID1B)
03036 Chromosome and associated proteins [BR:
acyg03036
]
106034239 (ARID1B)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
Helix-turn-helix
ARID
106034239 (ARID1B)
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106034239 (ARID1B)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106034239 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
106034239
NCBI-ProteinID:
XP_066850319
LinkDB
All DBs
Position
3:56401579..56728182
Genome browser
AA seq
2390 aa
AA seq
DB search
MAAQVAAAPAGAAKGTAPSLPAERGPGGAGSSPAGAPGAPGGVNNVEQRVPHRRQRHGEP
PDMANNAAPAAGNGNGSATAASASEPAAKEGGSSSALPPRSSPPSSSSSSSSNPGPAMET
GLLPNHKLKSVGGDHPAAPPQHHHHHHHRAQHPQHHAHHHHRAHHPHHHHHQHHHHHRPR
XQQQQQQQQLNQFPPPPPPQQPPPQHHPVQNNNSSLGGGGGGGSNNNGGGGGGAAQPSAD
MEQQQHGGKDSVLGAQAEPPQQPQQLLNKGADEEEMPGKMGEPIGGRYDHPGLGPLGGQQ
QPQQPPPSAGSGGGGGLGGGGGGGGSGGGGGGPSAAGVSEFNSYYGNAAPAPASSATASR
AGPCFDQHGGQQSPGMGIMHPAAAPNSMDPLQNSHEGYPNSQYNHYPAYARGPGGPGGGG
GAGGGGAGAVAAAAAAAAAGAGGGGGGGGGGGGGGYGGSAAGYGVLSSPRQPGGGMMMGP
GGGAGLGKAAAGAAAAGGFARFSGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPDYSSP
SAPPPPQPQPQAAAAAPGSQQAAAGMGMGKDMGAQYGAASPAWAAAQQRNHPAMSPGSTG
QTISRTQGSPMDPMVMKRPQLYGMGNNPHSQTQQSSPYPGQSYGPPGPQRYPVGMQGRAP
AAMGGMQYPQQQIPPQYGQQGVSGYCQQGQQPYYNQQPQHLPPQAQYLSQAQQRYQAQQD
MSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLP
TGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQS
RSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQ
TGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYTGVPNTSYSG
PGPGMGINANSQMHGQGPSQPCSTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGP
GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSGL
MNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEGAPQPESKSKDSYS
SQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEK
ITKVYELGNEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQV
NKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQP
KIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSV
HDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFM
TPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPPSGQP
PYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYSNAYTGPDR
RPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPY
QNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITR
PPQSSYQTPPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTG
PPPQPPPIRREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWA
LDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDQK
AAKKDDSQSLAEDTGKEENDECIDYFDEEEEEGDDEKVEEEKSIVFSTPGAIADPSERPK
QASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKME
IPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTE
SSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVP
GNDTEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEV
LRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQ
RLVLETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLA
QGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAA
KALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagtggcagcggccccggcgggcgccgccaagggcacggcgccgagcctg
cccgccgagcgcgggccggggggcgccggcagcagccccgcgggggctcccggggctccc
ggcggcgtgaataatgtagagcagcgcgtcccgcaccgccggcagcggcacggcgagccg
ccggacatggccaataacgccgctcccgccgccgggaacgggaacggctccgccaccgcc
gcctccgcctcggagccggctgcgaaggaaggtggaagctcctcggcgctgcctccgcgc
tcctcgccgccttcctcctcctcctcctcctcctccaacccgggcccggccatggagacg
gggctgctccccaaccacaagctgaagagcgtcggaggcgatcaccccgccgcgccgccc
cagcaccaccaccaccaccaccaccgtgcccagcacccgcagcaccatgcccaccaccac
caccgtgcccaccacccgcaccaccaccaccaccagcaccaccaccaccaccgcccccgc
ncgcagcagcagcagcagcagcagcagctaaatcaattcccgccgccgccgccgccgcag
cagccgccgcctcagcaccatcccgtgcagaataacaacagcagcctcggcggcggcggc
ggcggcggcagcaacaacaacggcggtggcggtggcggcgctgctcagcccagtgcagac
atggagcagcagcaacatggaggaaaagacagtgttttgggcgctcaggccgagcccccg
cagcagccgcagcaactgctgaataaaggcgccgacgaggaggagatgcccggcaaaatg
ggcgagcccatcggcggccgctacgaccaccccggcttgggacccctgggcggacagcag
cagccccagcagccgcccccgagcgctgggagcggcggcggcggcggcctcggcggcggc
ggcggcggcggtgggagcgggggaggcggcggcggcccctccgcggcgggtgtctcggag
ttcaatagctattatggcaacgctgcccctgcccctgccagcagcgctacggcgagccgc
gccgggccttgctttgatcaacatggcggacaacaaagccccgggatggggataatgcac
cccgcggcggcccccaacagcatggaccccctgcagaactcgcacgaagggtaccccaac
agccagtacaaccactacccggcctacgcccgcggccccggcggccccggcggcggcggc
ggcgcgggcggcggcggcgcgggagccgtggcggcggcggcagcggcggcggccgccggg
gcaggcggcggaggaggcggcggcggaggaggcggcggcggaggctacgggggctcggcg
gccggctacggggtgctgagctccccgcggcagccgggcggcggcatgatgatgggcccc
ggcggcggggccggcctcggcaaggctgctgccggcgcggcggcggccggcggcttcgcg
cggttctccgggcagaaccagcacccgtccggggccacccctaccttgaaccagctgctc
acgtcccccagccccatgatgcggagctacggcggcagctaccccgactacagcagcccc
agcgccccgccgccgccgcagccccagccccaggcagcggcggccgccccgggcagccag
caggcagcggcgggcatgggcatgggcaaggacatgggcgcccagtacggggcggccagc
ccggcctgggcagcggcgcaacaaagaaatcacccggccatgagccccggcagcaccggg
cagaccatcagcaggacgcagggcagtccaatggatccaatggtgatgaagagacctcag
ttgtacggcatgggcaataaccctcactctcagacgcagcagagcagcccctaccccggg
cagtcctacggccctcccggcccccagcgctaccccgtgggaatgcagggacgagccccg
gccgccatgggaggaatgcagtatccgcagcaacagataccgcctcagtatggtcagcaa
ggcgtgagcggctactgccagcagggccagcaaccgtattacaaccagcagccgcagcac
ctgccgccccaggcgcagtatctgtcgcaggcccagcagaggtaccaggcccagcaggac
atgtctcaggaaggctatggaaccagatctcaaccccctatggccccaggaaagcctaac
catgaagacttgaatctaatccagcaagaaagaccatcgagcttaccagttgaagtcttg
gcctccgaggatgctacatttggacacaaggatttgtctggatccattgatgacttgccg
actggaactgaagcaacgctgagctcagctgttagcgcatcaggctctacaagcagccaa
ggggagcagagcaaccctgcacagtctccattctcccctcatgcttctccacatctctct
ggcatccccgggggcccatcgccttcccctgtaggctctcctgttggaagcaaccagtcg
aggtctggtcccatttctccagcaagtattccaggcagtcagatgccaccgcagcctcct
ggcagccagtcagaatccagctcccaccctgctttgagccagtcaccaatgccacaggac
cgaggttttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaa
actggaccttccatgtcaccacacccctcacctggaggccaagtgcatcctggaattggt
agctttcagcagagtaattcaagtggtacttatgggcctcagatgagccagtatggacca
caaggaaactactccagaccaccaacatacactggcgtgcccaacacaagctacagtggc
ccaggacccggcatgggtataaatgccaacagtcagatgcatggacaggggccaagccag
ccttgtagtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccattt
cctggaaacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggcccc
gggatgggcccacccatgccaactgtgaaccgtaaggcacaggaggcagctgctgcagtg
atgcaggctgctgcgaactccgctcagagcaggcaaggcaattttcctgccatgaatcaa
agcggtattatgggatccagctccccctacactcagccgatgaacaacagctctggcttg
atgaacccgcaggctcctccatacagcatggcacctaacatggtgaacagctccacagca
cctatgggtcttgcagatatgatgacacccggtgagtccaaactaccccttcctctcaaa
gcagatggcaaagaagaaggagcccctcagcccgagagcaagtcaaaggatagctacagc
tctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcc
ccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagccca
ggctggccaaagactccatcaagccctaaatcaagttcctctaccacaactggagagaag
atcacaaaagtctatgaactaggaaacgaaccagagcgcaagatgtgggtagaccggtac
ctcacattcatggaggagaggggcacacctgtggccagtctgcctgctgtgggcaagaag
cccttagacctgttcaggctgtacgtctgtgtcaaagagattggaggtttagcacaggtt
aataaaaacaagaagtggcgtgagctggcaacaacattgaacgttggcacttcgagcagt
gcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaagatc
gagcgaggggaggagccccctccagaagtcttcagcactggagataccaagaaacaacct
aagattcagccgccatctcctgctaattctggttccttgcaaggtccacagactccacag
tctactggtagtaattccatgacagaagtgccaggcgatttgaagcccccaacaccagca
tcaacacctcatggacagatgacacctatgcagggtggcagaaacagcgcagttagtgtg
cacgatcccttttctgatgtaagtgattcagcattcccgaagcgaaactccatgacgcca
aatgcaccgtaccagcagggaataaacatgccagatatgatgggaaggatgccatatgag
ccgaataaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttcatg
acccctggacaaatgcccaacagtggaatacaggatatgtataaccagagtccatctgga
gcgatgtccaacatgagcatgagccagcgacagcagttctcttatggaagtggctatgac
aggaggcatgaaccatacgggcagcagtatccaggacaaggacctccctcaggacagcca
ccatatggaggacatcaacctggaatgtatccacagcagcagaactataagcgacacatg
gatggcatgtatgggcccccagccaagcgccatgaaggggatatgtataacatgcagtat
ggcaaccagcaacaggaaatgtacaaccagtacagcaatgcttacactgggcctgacagg
aggcccatgcagggacagtatccatatccatataacagggagaggatgcagggcccaggg
caaatgcagcagcatggaatacctccccagatgattggtggccccatgcagtcgtcgtcc
tccagcgaaggtcctcagcagaacatgtggccaacacgaaacgatatgccttacccttac
cagaataggcaaggtccaggaggccctgcacaggccccgccgtatccagggatgaatcgc
actgatgatatgatggtacctgaccagaggataaaccacgagagtcagtggccttctcat
gtcaaccaacgtcagccttcttatatgtcatcctcagcctccatgcagcctatcactaga
cctcctcagtcatcctaccagacgccaccctctatgccaaatcacatctctagagctcca
agtccagcatccttccagcgctctttggaaaaccgtatgtctccaagcaagtctcctttc
ctaccctccatgaagatgcaaaaagttatacccacagttccagtgtcacaggtcacagga
cctccaccccaaccaccaccgattaggcgagaaattaccttccccccaggctctgtagaa
gcatcgcaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgtaactcct
gaggcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgggcg
ctagacactattaatattcttctgtatgatgacagcactgtcgctactttcaacctctct
cagttgtctggatttctagagcttttagtagaatattttagaaaatgcctgattgacatt
tttggaatccttatggaatatgaagtgggagatccaggtcacaaagcacttgatcagaaa
gcagccaagaaagatgatagccagtccttggcagaggatactggaaaagaggagaacgat
gaatgtattgactattttgatgaagaggaggaggagggggatgatgaaaaggtagaagaa
gaaaaaagcattgttttttccactcctggtgccattgctgatccaagcgagaggccaaaa
caagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctatttgtt
gttgaccgatctgacaaacttggacgcgttcaggaatttgatagtggacttctccactgg
cagcttggtggtggtgacacaactgagcatatccagactcactttgaaagcaagatggag
attcctccacgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggacctc
gaggggaaaggtgaatctgaggaacagcaagaaaaaagtataacagcaaccattgacgat
gtcctctcagcccggccaggagcattgcctgaagactcaaactctggttcccaaacagag
agcagtaaatttccctttgggatccatcaagccaaaagccaccggaatattaaactgcta
gaggatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaagac
tccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtgcct
ggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctgggaaagttgatc
cttcttcaccatgagcatccagaaagaaagcgagcgccgcagacttacgagaaagaggaa
gaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtc
ttaagggataatacattggtcacattagccaacatttctgggcagctagacttgtctgct
tacacagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgccca
tctgcggaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcctcag
agacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggaccttatc
ttggccacccccccattcagtcgtcaggagaaactctacgctactttagttaggtacgtt
ggggatcgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcgaaccttgcc
cagggggacacattagcagcaagggcaatagctgtgcagaagggaagcatcggaaacttg
ataagcttcctggaggatggggtcaccatggcccagtaccagcagagccagcataacctc
atgcacatgcagcctccgcctctggagccacctagcgtagacatgatgtgcagggcagcc
aaggccttgctggccatggctagagtggacgagaaccgctcagagttccttttgcacgag
ggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtcatc
tgtgatgtactttttcagattgggcagttatga
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integrated database retrieval system
