Anser cygnoides (swan goose): 106034491
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Entry
106034491 CDS
T04896
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X3
KO
K10864
DNA mismatch repair protein PMS1
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106034491 (PMS1)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106034491 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
106034491
NCBI-ProteinID:
XP_047914423
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All DBs
Position
6:complement(5841024..5888388)
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AA seq
931 aa
AA seq
DB search
MKQLPAETVRLLSSSQVITSVVSVVKELIENSLDASATSIDVKLENYGFDKIEVRDNGSG
VKVADVPVMAIKHYTSKISSSEDLEKLTTYGFRGEALGSICCISEVLITTKTAADSISTQ
YTLDNSGHITSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKIQDLLIAYG
IIKPDLRIIFTHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCCEDPEINLSGFL
PKAESDSSLTCLSGSERSFIFINNRPVLQKEILKLIRQYYSAASHKDSTRLYPVFFLNIT
VPASAVDVNLTPDKTQVLLQYKESVLFAVENVLKSLYGPLPATVSGEANKTDVTSEDMFV
HKTGQTDVVVNEMEPSGNNDLHAHTSFLSFSSDVQNCQAGKNTEICLNHQAFCGDNIRSR
LEEKEVSKSDAFQDGSLNLLREEEQNGQNTTDIPSCSAPMEPEYKKADEHLLSSDNTCEI
EKNEETSVPKDLPEISADNWSMGNGFKNSLGDNLEPVKILIPEVGGATNKQSERAGEQSC
DPQTLNQSIKKTNVINDKTGQVTAYDLISSRIIRKPKTAFALFTQEYRSKLFSEHPKISM
KDILLKIEEQWKNLDEEEKKNYEIKAAKDLERYNREASKAMQQAVHRPTKETERQKPRLK
TSLSNQQKLDKMFHAQTEKKQKSDQPLKTVTVPFSLSSCRHQRHEKSNSDEHELYLIRRQ
SFPDIWIFATEKKLMLLNPYRLEEALLHKRLLKNHQLPVEKLDKPIVLTDSILGGSHYMS
ALYKMQKDYQRLNGSGYLTDPRLVANGFQIKVIEGASPTESHMEIEGMANCLSYYGLSDL
KEILNAVVNRNAKEVYECRPLKVLNYLEGEAVRLARQLPLHLSKEDVQNTIYRMKQQLGR
ENKGCVHGRPFFHHLTDIPEVNKHNSKEFIQ
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctcccggcagaaactgttcgtctcctttcaagctctcaggtgattacatct
gttgtcagcgtggtgaaggagctgatagaaaattccttggatgccagtgccacaagtatt
gatgttaaactggagaattatgggtttgacaaaatagaagtaagagacaatggcagtgga
gtcaaggtcgctgatgttccagttatggcaattaaacactacacctcaaaaataagctct
tctgaggatcttgaaaagctgacgacgtatggttttcgtggggaagccctgggatcaatt
tgttgcatatcagaggttttgatcacaacaaagacagctgctgatagtatcagcactcaa
tatactttggataatagtgggcatataacttcccaaaagccttcccatcttggacaaggt
acaacagtgacagtcctcaagttgtttaagaaccttcctgtaagaaaacagttttactcg
acaaatagaaaatgtaaggaagaactgaaaaaaatccaagatcttctgatagcatatggc
atcataaaaccagacctgaggataatctttacacataataaggcagttatttggcaaaag
accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacactgctgtgaagatcctgagataaatctttctggatttctc
ccaaaagctgagtcagacagctctttgacatgtctgtcaggttcagaaaggagtttcatt
tttataaacaatcgtccggttcttcagaaggaaatactgaagttaattcgacagtactac
agtgcggcgtcacacaaggacagtacccgcttataccctgttttctttttgaatattact
gtacctgcatctgctgtggatgtgaatttaacgcctgataaaactcaagttttactgcag
tacaaggagtctgtcttatttgctgttgaaaatgtgttgaaatcactctatgggccacta
cctgctacggtctctggtgaagctaataaaacagatgttacctcagaagacatgtttgtt
cataaaacaggacaaacagatgtggttgttaatgaaatggaaccatctggaaacaatgat
ctacatgctcatacttcattcctttcattcagcagtgatgtgcaaaattgtcaagcagga
aaaaacacagagatctgtttaaatcatcaggcattttgtggtgataatatacgtagtcgc
ctagaggaaaaagaggtttctaagagtgatgcctttcaagacggttccttaaatttattg
cgtgaggaggaacagaatggacagaatacaaccgatattccaagttgcagtgctccaatg
gaacctgaatataaaaaagctgatgagcatcttttgagttctgataatacttgcgagata
gaaaaaaatgaggaaacctcagtacctaaagacttacctgaaatctctgctgataattgg
agtatggggaatggatttaaaaactctctaggagacaacctggaacctgttaagatttta
attcctgaagttggaggagcaactaataagcaaagcgaacgtgctggtgaacaaagctgt
gatccacaaaccctaaatcaaagtataaagaaaacaaatgtaataaatgataaaactgga
caagtaactgcttatgacttaattagtagtcgaataataaggaaaccaaagaccgcattt
gccctcttcacccaagaatatcgttcaaaattgttttctgagcacccaaagattagcatg
aaggacatcctgttgaaaattgaagaacagtggaagaatttggatgaagaggaaaagaag
aattacgaaataaaagctgctaaagacctggaacgatacaacagagaggccagtaaagct
atgcagcaagcagtgcacagacccacaaaggagacagagagacagaaacccaggctgaag
acttccctgtccaaccagcagaagcttgacaaaatgttccatgctcaaactgaaaagaag
cagaaatctgaccagcctttgaaaactgtgacagtacctttttccctgagttcctgtaga
catcagaggcatgagaagagtaattcagatgaacacgagctttacctgatccgtcgtcag
agttttcctgatatctggatatttgctactgaaaaaaagctaatgttgctgaatccatat
agattggaagaagccctgctgcacaaaagattgctgaagaatcatcagcttccagtagag
aaactggacaagccaattgtgttaacagacagtattcttggtggatctcactatatgtct
gctctttacaaaatgcagaaggattaccagagattaaatggatcaggttatttgacagat
ccaaggcttgtagcaaatggattccagataaaagtgatcgaaggtgcttcacctacagag
agtcatatggaaatagaaggaatggctaattgtctgtcatactatggtctttctgatttg
aaagaaattctgaatgcagtagttaataggaatgcaaaggaagtatatgaatgtaggcct
ctcaaagtgctaaattacttggagggagaagcagtgcgtttagctcggcagctgccctta
catttgtcaaaagaagatgtacaaaacacaatttacaggatgaagcaacagcttggaagg
gaaaataaaggctgtgttcatggtcgtcctttttttcatcacttaacagatattccagaa
gttaacaagcacaactccaaggaatttattcagtaa
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