Anser cygnoides (swan goose): 106034572
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Entry
106034572 CDS
T04896
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106034572 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106034572 (BARD1)
04121 Ubiquitin system [BR:
acyg04121
]
106034572 (BARD1)
03036 Chromosome and associated proteins [BR:
acyg03036
]
106034572 (BARD1)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106034572 (BARD1)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106034572 (BARD1)
Ubiquitin system [BR:
acyg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106034572 (BARD1)
Chromosome and associated proteins [BR:
acyg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106034572 (BARD1)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106034572 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4
NIBRIN_BRCT_II
PTCB-BRCT
ANK_LRRK2
zf-rbx1
zf-C3HC4_4
zf-RING_10
zf-RING_UBOX
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
106034572
NCBI-ProteinID:
XP_013034261
LinkDB
All DBs
Position
6:complement(10327517..10376838)
Genome browser
AA seq
799 aa
AA seq
DB search
MAAGGQFGAAMAAGPREALRGRSGNRLDPGGQPGPMAPPGHPWALTRAALGRLERALSCS
RCAGILREPVSLGRCEHVFCLSCVGDCVGTECPVCHMPAWVQDVQINRQLDNMIQLCSKL
RHLLGADTSDSTECISTPTGSDSGKNSKKEQIKMWFSPRSRKIRCILNKGQPKTKSDSPC
QDPSSVYHFFPSPPHEKPKPTKKPAQRQSKNVKKKRLADINKVWGLGKPEHKGGVEEKTS
KEKCVTICSQPVVLCTPEPTGPEEMLPQEPLKEADSNTNVEKLETSPEVQSSEENDNSLD
ACPAHVSKEKNCATEESPSIGNETTPLKRGREQSSLPVSSQTKRRRRAEGSTSGSAGRQA
ARLEESPQGSPISQATEPKTPVQVSSSVSKLAGTAMKTRSSAAMNSPSFPKSPSTPSTSK
TCNQVGTPHSPSVFKSPGGANAVARRNYKGETLLHVASIKGDLGAVEQLLKNGADPNVKD
NAGWTPLHEACNHGHKAVVELLLQHKALVNTTGYQNDSPLHDAVKNGHMSIAELLLLHGA
SRDAVNIFGLRPVDYADSEKMKSVLMLPVKNESFSLSQPSESQSPSQPRDGPLGILGSSL
NSEQQKLLNKLVTVLKARRCTEFNSTVTHLVIPDVPMPSTVKCLMAVLTGCWVLKFEWVR
ACLQSTVREQEEKYEIQGGPQRSRLNREQLLPKLFDGCYFYFLGSFSSHQKSDLVELVKA
AGGQILVRQPKPDSDVTQMINTVAYHAESTSDQRFCTQYVIYDVSSKFKPEKIRQGKVWM
APSSWIIDCVMSFQLLPVK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgggcaattcggagcggcgatggcggcggggccccgtgaggcgctgcgc
ggccgctccggcaaccggctggacccgggcgggcagcccggccccatggcgcctccaggg
cacccctgggcgctcacccgagccgcgttggggcggctggagagggcgctgagctgctcc
cgctgcgcaggtatcctgagggagcccgtgtccctggggcggtgcgagcacgtcttctgc
ctatcttgtgtgggcgactgtgtcggcacagaatgcccggtgtgccacatgccagcctgg
gtgcaagatgtgcagataaaccggcagctagataacatgatccagctttgcagcaaactg
cggcatctgttgggcgcagacacctcggattcaacagaatgtatatccacaccaacaggc
tccgactctgggaaaaatagtaagaaggaacagataaaaatgtggttcagcccaagaagc
aggaagattcgatgcatcctgaacaagggtcagcctaagactaaaagcgatagcccttgc
caagacccatcttcagtttatcatttctttccttcccctcctcacgaaaaacccaagcca
acaaaaaagccagcacagaggcagagtaagaacgtgaagaaaaaacgtctagcagacatc
aacaaagtgtggggcttagggaaacctgagcacaaaggaggagttgaggagaagacttcc
aaggaaaagtgtgtgaccatttgtagccagccagttgtcctgtgcactccagagcctact
ggccccgaagagatgcttccacaggagcctctaaaggaagctgactccaacacaaatgtg
gagaaattagaaacgtcaccagaggtacaatcctcagaggagaatgataacagcttggat
gcctgtcctgcgcatgtcagcaaggaaaaaaattgtgctacagaggaatccccatcaata
ggaaatgaaactacgcctttgaaacgtggaagggagcaatcaagcctcccagtttcgtct
cagactaaaaggcgccgaagagctgaggggagcactagtgggagtgcgggcaggcaggca
gctcgcttggaggagtcgcctcagggcagccccatctcccaagcgactgaacccaagaca
cctgttcaggtttcctcctctgtatcaaagctcgctggcactgcgatgaagacaagaagc
tctgcagcaatgaatagtccttcgtttcccaaatctccctctactccctctacttccaag
acatgtaatcaagtaggaacaccacacagtccttctgtgttcaagtcccctggtggcgct
aacgcggttgcccgaagaaactacaaaggagagactttgctccacgttgcttccatcaag
ggtgacttaggagctgttgaacagctgctgaaaaatggggcagatcccaatgttaaggac
aatgctggctggacaccactgcacgaggcgtgtaaccatgggcacaaagcggtggtggag
ctgctgctgcaacacaaagcactggtgaacaccacgggctatcagaacgactcgcccctg
cacgatgctgtcaagaatgggcacatgagcattgctgagctgctgcttttgcacggggcc
tcccgcgatgcagttaatatatttggtctgcggcctgtggactatgcagacagtgaaaag
atgaagtctgtgctaatgttaccagtgaagaatgaatcattttcacttagccagccctct
gagtcacagagccctagccagccaagagatggacctcttggcatactggggagcagtctt
aattcagagcagcaaaaactgctgaacaagctagtgacagtcctgaaggctagaaggtgt
accgaatttaacagcacagtaactcatcttgttatccccgacgttccaatgccaagcact
gtcaaatgtttgatggctgttctgactggatgttgggtcctcaagtttgaatgggtacga
gcctgtctgcaaagtacagtccgagaacaagaagagaagtatgaaatccaaggtggccca
caaagaagccggctcaacagagaacagctgctgccgaagttgtttgatggatgctacttc
tattttctgggatctttcagtagtcaccagaagagtgatcttgtggagttggtcaaagca
gcaggaggccaaattctggttaggcagccaaaaccagacagtgatgtgacgcagatgatc
aacacggtggcataccatgcagaatcgacttctgaccagcggttttgtactcagtatgtc
atctatgatgtgtcttctaaattcaagccagagaaaattcgtcagggcaaagtctggatg
gccccctccagctggattatagactgtgtaatgtcatttcagctgttgcctgtaaagtga
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