Anser cygnoides (swan goose): 106034801
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Entry
106034801 CDS
T04896
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acyg
Anser cygnoides (swan goose)
Pathway
acyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106034801 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acyg03041
]
106034801 (DDX5)
03009 Ribosome biogenesis [BR:
acyg03009
]
106034801 (DDX5)
Enzymes [BR:
acyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106034801 (DDX5)
Spliceosome [BR:
acyg03041
]
Complex A
U1 snRNP components
U1 related factors
106034801 (DDX5)
Complex B
106034801 (DDX5)
Ribosome biogenesis [BR:
acyg03009
]
Eukaryotic type
Pre-60S particles
Helicases
106034801 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
106034801
NCBI-ProteinID:
XP_047920324
UniProt:
A0A8B9IE77
LinkDB
All DBs
Position
19:complement(9130444..9137953)
Genome browser
AA seq
603 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTVQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKAQNGAYTAQSFSNGTPFGNGF
AAAGMQAGFRAGNPAGAYQNGYDQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPAS
YSQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggacagagggtttggagcacctcggtttggaggaagt
agaggtggacctctttctgggaagaaatttggaaaccctggggaaaaacttaccaaaaag
aaatggaatttagatgaactgcccaaatttgaaaagaacttctatcaagaacatcctgat
gtagttagacgtactgtgcaagaggttgagcagtacaggtcaagcaaagaagtcacagtt
aggggccataactgtccaaaaccaataataaacttctatgaagccaactttcctgcaaat
gttatggaagtgattcagaggcagaacttcactgaaccaactgctatccaagcacaggga
tggcctgttgccttgagtggattggatatggttggagttgcacagactggatcagggaaa
acgctgtcttacttgttgcctgctattgtgcatataaatcatcagccattcctagagcga
ggagatggacctatttgtcttgtgctggcaccaactcgtgaactggctcaacaagtgcag
caagtagccgctgaatacagcagagcatgccgcttgaagtctacatgtatttatggaggt
gctccaaagggaccacaaattcgtgacttagaaagaggtgtggaaatttgcattgcaaca
cctggaagacttatagacttcttagaagccggaaagaccaatctcaggaggtgtacttac
cttgttcttgatgaagctgaccggatgcttgacatgggatttgaacctcagatcagaaaa
attgtggatcagataagacctgacaggcaaactctgatgtggagtgccacatggccaaag
gaagtaaggcagctggctgaagacttcttgaaagaatatgtacacatcaacatcggtgca
ttggaactgagtgcaaaccacaacattcttcagattgttgatgtgtgccatgatgtagag
aaagatgacaagcttattcgtctgatggaagaaatcatgagtgagaaggaaaacaaaaca
atagtttttgtggaaaccaaaagacggtgtgatgatcttaccagaaaaatgaggagagat
gggtggccagcaatgggtattcatggtgataaaagtcagcaggaacgagactgggttcta
aatgagttcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatattctgcgggcaaaaggggtggatttagtagttttagagag
agggagaattttgagagaacctatggtgcactaggaaagagagactttggagcaaaagct
caaaatggggcctacactgcccaaagtttcagtaacggaactccttttggaaatggtttt
gcagctgcaggcatgcaagctggcttcagggctggtaaccctgcgggagcttaccagaat
ggctatgaccagcagtatggaagtaacattgcaaatatgcacaatggcatgaaccaacag
cagtatgcatatcctgccactggtgctgctcctatgataggttacccaatgccagcaagt
tattctcaataa
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