Anser cygnoides (swan goose): 106035107
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Entry
106035107 CDS
T04896
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
acyg
Anser cygnoides (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acyg04515
]
106035107 (PCDH8)
Cell adhesion molecules [BR:
acyg04515
]
Cadherins
Protocadherins
106035107 (PCDH8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
106035107
NCBI-ProteinID:
XP_013035171
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Position
1:179566685..179571042
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AA seq
998 aa
AA seq
DB search
MGPLRLLAASCLLAMSRCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPRAQMTLEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPTFARGSVT
VELPEDAPPGSLLLDLDADDPDEGPNGEVVYAFGSQVPPEARRLFRLDPRSGRLTLEAAV
DYERTRTYELDVRAQDRGASPRAATCTVIVRLADVNDNAPRISISALRGAGSAAGVAYVS
EAAASESFVALVSASDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTLVKVRMVDQNDNPPVIIHPVLTNGSVEIGVSSKTSRDSLVAQIKARDADDG
ANAELTFAFLEEPQQDLFTINPSTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQEVAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNRR
KKGNEIKNNTSLKEQIDISHLEKGRQEDSSPRGNMFEVRTFPSKTSFTSPDPSPAAEEIS
AAESSSDSAGLYEGQKRLRGPSGEQGFAAAPSFGKEPAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLYPASSTRYLGPQTDTTEKV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgctgcggctgctggccgccagctgcttgctggccatgtcccgctgcaagacg
gtgaggtaccgcaccgacgaagaaggggctccgggcacggtgatcggcacgctggccgat
gagatgccggtgaaggctcccggggagatgagcttccgactgatgcggcagttcagcaac
agctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggcgaagcggggctg
gaccgggagcggctgtgcggacaggccccgcagtgcgtgctggccttcgatgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgcgacatcaatgac
aatgcgccccgcttcccccgggcgcagatgacactggaagtgtcagagagcgccgcacct
ggcacgcgcctcccactggaggtggcagtggacgaggatgtgggctccaattccatccag
agcttccaggtctccctcaacagccacttcggcgtggaggcacagacgagggcggacggg
gcacgctgtgctgacctggtgctgctccaggagctggaccgtgagcgccagccctcctac
accctggagctggtggccaaggatggcggcagcccagcacgctcgggcacagccaccgtg
catgtccgtgtgcttgacgccaatgacaacagccccaccttcgcccggggctcggtcacg
gtagagctgcccgaggatgcaccacctggctccctgctgctcgacctggatgccgatgac
cctgatgagggccccaatggggaggtggtctacgcttttggcagccaggtgccccctgag
gcacggcggctcttccgcctcgacccacgctctggccgcctgacactggaggccgctgtg
gactatgagcgcacccgcacctacgagctggatgtgcgtgcccaggaccgtggtgccagc
ccccgtgctgccacctgcactgtcattgtgcgcctcgccgatgtcaatgacaacgcgcca
cgtatcagcatcagtgccctccgtggtgccggcagcgccgctggcgtggcctacgtcagc
gaggcagcagccagcgagagcttcgtggccctggtcagtgcctccgaccgtgactcgggc
gccaatgggcaggtgcgctgcagcctccgtggccatgaccactttgccctgcagcgtgcc
tatgaggacagctacatgattgtcaccacggcagcactggaccgtgagcgcatccctgag
tataacctcaccgtggtggctgaggacctgggctcaccgcccttcaagaccgtccgccag
tacacagtgcgggtgagcgatgagaatgacaacgcaccactctttgccaagcccctctac
gaggtggctgtgccagagaacaaccccccaggtgcctacatcaccactgtggtggcccga
gaccctgatctcggccacaatggtaaggtcacctaccgactactggagacccaagtcatg
ggggcccccatctccacctatgtctcagtggatcccgccactggggccatctacgccctt
aggacgttcaactatgagatactcaagcagttggacctgaggatccaggccactgatgga
ggctccccgcagctctccagcagcactcttgtcaaggtgaggatggtggaccagaacgac
aaccctcccgtcatcatccacccagtgctcaccaatgggtcagtggaaatcggcgtgtcc
agcaagacctcccgtgactccctggtggcccagatcaaagctcgagatgcggatgatggg
gccaatgctgagctcacctttgccttcctggaagagccccagcaggaccttttcaccatc
aacccgagcactggggacattgtgctgaggggagacctctctgaagagctgggacagctg
ttcaaggtcatcctcactgtgacagacaatggcagaccccctctggccacgactgccacg
gtcaacttcctggtgactgccactgctccttccagtattcaggaggtagccaagcccagc
tcctgggaaggaaaagctttgcagtgggacatccctctgatcgtgatcatcgtcctggca
ggcagctgcaccctcctcctggtggctatcatcaccatcgccaccacctgcaacaggcgc
aagaaggggaacgagatcaaaaacaacacctccttgaaggagcagatagacatctcccac
ctggagaagggccggcaggaggacagcagcccgaggggaaatatgtttgaggtacgaacc
tttcccagcaaaacctctttcaccagccccgacccttctccggcagccgaagagatctct
gctgccgagagcagcagtgacagcgctggcctctacgagggtcagaagaggctcagagga
cccagcggggagcagggttttgctgctgctccaagctttggcaaagagcccgctcccccc
gtggccatctggaaggggcactccttcaacaccatctccggccgagaggcagagaagttt
agcggcaaagacagtggcaaaggcgacagcgatttcaatgacagtgactcggacatcagc
ggagatgccctgaagaaggacctcatcacgcacatgcagaatggtctgtgggcttgtacg
gctgagtgcaagatcctgggtcactcggaccgctgctggagcccgtcctgcggccgagcc
aacccccacccctctccccacccgtcggcacccctctccaccttctgcaaaagcacgtcc
ttgcccagggaccccctccgcagggacaacttttaccaggcccagctgccaaagacagtg
gggctccagagtgtctacgagaaggtgctgcatagggactttgaccggacgatcacgctg
ctctccccaccgcgtcccgcacggctccctgacctccaggagatcggggtgcccctctac
ccagcctcctcgactaggtacctgggtccccagactgacacaactgagaaagtgtag
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